DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PTSST
Uniprot ID:
Q7Z5J4
Source protein:
Retinoic acid-induced protein 1
Source gene:
RAI1
Class:
DEG_SPOP_SBC_1
Location:
217:221
E3 ligase:
SPOP
DEGRON score:
0.9896
ASA_SCORE:
88.28
COIL:
0.958
CONS_SCORE:
0.4256
DSS_SCORE:
0.6254
HELIX:
0.026
FCONS_SCORE:
1.0796
RIG_SCORE:
0.62
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q211R
TCGA-CD-A4MI
STAD
TCGA
PTSST
DEG_SPOP_SBC_1
0.1667
p.Q211R
DO47717
STAD
ICGC
PTSST
DEG_SPOP_SBC_1
0.1667
p.T221I
TCGA-CV-7413
HNSC
TCGA
PTSST
DEG_SPOP_SBC_1
0.7078
p.T221I
DO15567
HNSC
ICGC
PTSST
DEG_SPOP_SBC_1
0.7078
p.P217S
TCGA-EB-A5UL
SKCM
TCGA
PTSST
DEG_SPOP_SBC_1
0.6752
p.P217S
DO47601
SKCM
ICGC
PTSST
DEG_SPOP_SBC_1
0.6752
p.F216L
DO218173
BRCA
ICGC
PTSST
DEG_SPOP_SBC_1
0.3056
p.T221A
SIDM00799
Glioblastoma
GDSC
PTSST
DEG_SPOP_SBC_1
0.7139
p.T221A
ACH-000558
Brain Cancer
CCLE
PTSST
DEG_SPOP_SBC_1
0.7139
p.T221A
A172
central_nervous_system
COSMIC
PTSST
DEG_SPOP_SBC_1
0.7139
p.S219F
ACH-002785
Unknown
CCLE
PTSST
DEG_SPOP_SBC_1
0.7982
p.G211D
LCLC-97TM1
lung
COSMIC
PTSST
DEG_SPOP_SBC_1
0.1667
p.D226E
H2810
pleura
COSMIC
PTSST
DEG_SPOP_SBC_1
0.1944
p.T218I
NCI-H1341
lung
COSMIC
PTSST
DEG_SPOP_SBC_1
0.5966
Drug responses associated with RAI1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PTSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14523
Phospholipid transfer protein C2CD2L
DEG_SPOP_SBC_1
418:422
PTSST
SPOP
0.9786
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
192:196
PTSST
SPOP
0.99
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3040:3044
PTSST
SPOP
0.6013
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4197:4201
PTSST
SPOP
0.7113
More...
Q00587
Cdc42 effector protein 1
DEG_SPOP_SBC_1
144:148
PTSST
SPOP
0.9968
More...
Q02817
Mucin-2
DEG_SPOP_SBC_1
1289:1293
PTSST
SPOP
0.8909
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
2061:2065
PTSST
SPOP
0.7841
More...
Q5MJ10
Sperm protein associated with the nucleus on the X chromosome N2
DEG_SPOP_SBC_1
4:8
PTSST
SPOP
0.9481
More...
Q6NW40
Repulsive guidance molecule B
DEG_SPOP_SBC_1
126:130
PTSST
SPOP
0.901
More...
Q6XYQ8
Synaptotagmin-10
DEG_SPOP_SBC_1
165:169
PTSST
SPOP
0.9752
More...
Q71F56
Mediator of RNA polymerase II transcription subunit 13-like
DEG_SPOP_SBC_1
2000:2004
PTSST
SPOP
0.8758
More...
Q7Z2Z1
Treslin
DEG_SPOP_SBC_1
352:356
PTSST
SPOP
0.7312
More...
Q7Z5J4
Retinoic acid-induced protein 1
DEG_SPOP_SBC_1
217:221
PTSST
SPOP
0.9896
More...
Q8IUR6
CREB3 regulatory factor
DEG_SPOP_SBC_1
207:211
PTSST
SPOP
0.9783
More...
Q8N302
Angiogenic factor with G patch and FHA domains 1
DEG_SPOP_SBC_1
262:266
PTSST
SPOP
0.9756
More...
Q8WZ74
Cortactin-binding protein 2
DEG_SPOP_SBC_1
394:398
PTSST
SPOP
0.9594
More...
Q96L91
E1A-binding protein p400
DEG_SPOP_SBC_1
699:703
PTSST
SPOP
0.7029
More...
Q9HCM3
UPF0606 protein KIAA1549
DEG_SPOP_SBC_1
1911:1915
PTSST
SPOP
0.9958
More...
Q9ULH7
Myocardin-related transcription factor B
DEG_SPOP_SBC_1
544:548
PTSST
SPOP
0.9796
More...
Q9UNA1
Rho GTPase-activating protein 26
DEG_SPOP_SBC_1
688:692
PTSST
SPOP
0.7165
More...
Q9Y2R2
Tyrosine-protein phosphatase non-receptor type 22
DEG_SPOP_SBC_1
568:572
PTSST
SPOP
0.6888
More...
Q9Y613
FH1/FH2 domain-containing protein 1
DEG_SPOP_SBC_1
391:395
PTSST
SPOP
0.8673
More...
A6NFR6
Uncharacterized protein C5orf60
DEG_SPOP_SBC_1
220:224
PTSST
SPOP
0.9363
More...
Q2M2H8
Probable maltase-glucoamylase 2
DEG_SPOP_SBC_1
2086:2090
PTSST
SPOP
0.6316
More...
Q5MJ09
Sperm protein associated with the nucleus on the X chromosome N3
DEG_SPOP_SBC_1
4:8
PTSST
SPOP
0.9373
More...
Q5MJ07
Sperm protein associated with the nucleus on the X chromosome N5
DEG_SPOP_SBC_1
4:8
PTSST
SPOP
0.6951
More...
Q5MJ08
Sperm protein associated with the nucleus on the X chromosome N4
DEG_SPOP_SBC_1
4:8
PTSST
SPOP
0.9627
More...