DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PVTSS
Uniprot ID:
Q3LI83
Source protein:
Keratin-associated protein 24-1
Source gene:
KRTAP24-1
Class:
DEG_SPOP_SBC_1
Location:
27:31
E3 ligase:
SPOP
DEGRON score:
0.9114
ASA_SCORE:
78.1
COIL:
0.8438
CONS_SCORE:
0.8944
DSS_SCORE:
0.1755
HELIX:
0.0254
FCONS_SCORE:
1.189
RIG_SCORE:
0.8217
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S31Y
TCGA-AN-A046
BRCA
TCGA
PVTSS
DEG_SPOP_SBC_1
0.712
p.S31Y
TCGA-EO-A3B0
UCEC
TCGA
PVTSS
DEG_SPOP_SBC_1
0.712
p.S31Y
DO1285
BRCA
ICGC
PVTSS
DEG_SPOP_SBC_1
0.712
p.S31Y
DO219773
UCEC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.712
p.S30P
DO229237
LMS
ICGC
PVTSS
DEG_SPOP_SBC_1
0.6752
p.V28L
DO50439
ESAD
ICGC
PVTSS
DEG_SPOP_SBC_1
0.5654
p.C24S
TCGA-56-8626
LUSC
TCGA
PVTSS
DEG_SPOP_SBC_1
0.25
p.C24S
DO45506
LUSC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.25
p.C24W
SIDM00118
Colorectal Carcinoma
GDSC
PVTSS
DEG_SPOP_SBC_1
0.25
p.C24W
ACH-001081
Colon/Colorectal Cancer
CCLE
PVTSS
DEG_SPOP_SBC_1
0.25
p.C24W
HCC2998
large_intestine
COSMIC
PVTSS
DEG_SPOP_SBC_1
0.25
p.S35G
SIDM01146
Gastric Carcinoma
GDSC
PVTSS
DEG_SPOP_SBC_1
0.2222
p.S35G
ACH-000932
Gastric Cancer
CCLE
PVTSS
DEG_SPOP_SBC_1
0.2222
p.S35G
NCI-SNU-1
stomach
COSMIC
PVTSS
DEG_SPOP_SBC_1
0.2222
p.S36P
DO234258
ESAD
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1944
p.R21I
TCGA-AG-3892
READ
TCGA
PVTSS
DEG_SPOP_SBC_1
0.1667
p.R21I
DO36394
READ
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1667
p.R21S
DO231598
LINC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1667
p.R21S
DO231553
LINC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1667
p.T17S
TCGA-69-7979
LUAD
TCGA
PVTSS
DEG_SPOP_SBC_1
0.0556
p.T17S
DO23874
LUAD
ICGC
PVTSS
DEG_SPOP_SBC_1
0.0556
p.T17I
TCGA-BH-A0DG
BRCA
TCGA
PVTSS
DEG_SPOP_SBC_1
0.0556
p.T17I
DO1257
BRCA
ICGC
PVTSS
DEG_SPOP_SBC_1
0.0556
Showing 1 to 23 of 23 entries
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Drug responses associated with KRTAP24-1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PVTSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
479:483
PVTSS
SPOP
0.9957
More...
O43670
BUB3-interacting and GLEBS motif-containing protein ZNF207
DEG_SPOP_SBC_1
264:268
PVTSS
SPOP
0.9888
More...
Q2M243
Coiled-coil domain-containing protein 27
DEG_SPOP_SBC_1
211:215
PVTSS
SPOP
0.6822
More...
Q9H4E7
Differentially expressed in FDCP 6 homolog
DEG_SPOP_SBC_1
561:565
PVTSS
SPOP
0.9921
More...
Q9Y253
DNA polymerase eta
DEG_SPOP_SBC_1
455:459
PVTSS
SPOP
0.7281
More...
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
DEG_SPOP_SBC_1
372:376
PVTSS
SPOP
0.9626
More...
Q12948
Forkhead box protein C1
DEG_SPOP_SBC_1
435:439
PVTSS
SPOP
0.9931
More...
Q01543
Friend leukemia integration 1 transcription factor
DEG_SPOP_SBC_1
409:413
PVTSS
SPOP
0.9612
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
508:512
PVTSS
SPOP
0.9914
More...
Q9BZI1
Iroquois-class homeodomain protein IRX-2
DEG_SPOP_SBC_1
282:286
PVTSS
SPOP
0.9926
More...
Q3LI83
Keratin-associated protein 24-1
DEG_SPOP_SBC_1
27:31
PVTSS
SPOP
0.9114
More...
Q2VYF4
LETM1 domain-containing protein LETM2, mitochondrial
DEG_SPOP_SBC_1
446:450
PVTSS
SPOP
0.9775
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5089:5093
PVTSS
SPOP
0.9713
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3945:3949
PVTSS
SPOP
0.9405
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1387:1391
PVTSS
SPOP
0.9755
More...
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2252:2256
PVTSS
SPOP
0.9947
More...
Q13029
PR domain zinc finger protein 2
DEG_SPOP_SBC_1
727:731
PVTSS
SPOP
0.9999
More...
Q8NHV4
Protein NEDD1
DEG_SPOP_SBC_1
449:453
PVTSS
SPOP
0.9326
More...
Q9Y458
T-box transcription factor TBX22
DEG_SPOP_SBC_1
324:328
PVTSS
SPOP
0.753
More...
A0AVK6
Transcription factor E2F8
DEG_SPOP_SBC_1
679:683
PVTSS
SPOP
0.7433
More...
Q8NCT3
Uncharacterized protein KIAA0895
DEG_SPOP_SBC_1
157:161
PVTSS
SPOP
0.9394
More...
Q8ND82
Zinc finger protein 280C
DEG_SPOP_SBC_1
211:215
PVTSS
SPOP
0.805
More...
Showing 1 to 22 of 22 entries
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