DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PVTSS
Uniprot ID:
Q9H4E7
Source protein:
Differentially expressed in FDCP 6 homolog
Source gene:
DEF6
Class:
DEG_SPOP_SBC_1
Location:
561:565
E3 ligase:
SPOP
DEGRON score:
0.9921
ASA_SCORE:
75.38
COIL:
0.8488
CONS_SCORE:
0.4784
DSS_SCORE:
0.6092
HELIX:
0.073
FCONS_SCORE:
0.9261
RIG_SCORE:
0.6513
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P573T
TCGA-29-1696
OV
TCGA
PVTSS
DEG_SPOP_SBC_1
0.1111
p.P573T
DO30190
OV
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1111
p.P561L
TCGA-BR-8487
STAD
TCGA
PVTSS
DEG_SPOP_SBC_1
0.7582
p.P561L
DO47867
STAD
ICGC
PVTSS
DEG_SPOP_SBC_1
0.7582
p.P561S
TCGA-BT-A3PJ
BLCA
TCGA
PVTSS
DEG_SPOP_SBC_1
0.6752
p.P561S
DO44097
BLCA
ICGC
PVTSS
DEG_SPOP_SBC_1
0.6752
p.R560H
TCGA-EK-A2GZ
CESC
TCGA
PVTSS
DEG_SPOP_SBC_1
0.3056
p.R560H
DO49937
CESC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.3056
p.R560H
ACH-001970
Metastasis
CCLE
PVTSS
DEG_SPOP_SBC_1
0.3056
p.L574V
TCGA-VS-A958
CESC
TCGA
PVTSS
DEG_SPOP_SBC_1
0.0833
p.L574V
DO51639
CESC
ICGC
PVTSS
DEG_SPOP_SBC_1
0.0833
p.D558Y
DO229027
LICA
ICGC
PVTSS
DEG_SPOP_SBC_1
0.25
p.E555D
DO229031
LICA
ICGC
PVTSS
DEG_SPOP_SBC_1
0.1667
Drug responses associated with DEF6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PVTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0AVK6
Transcription factor E2F8
DEG_SPOP_SBC_1
679:683
PVTSS
SPOP
0.7433
More...
O15018
PDZ domain-containing protein 2
DEG_SPOP_SBC_1
2252:2256
PVTSS
SPOP
0.9947
More...
O43670
BUB3-interacting and GLEBS motif-containing protein ZNF207
DEG_SPOP_SBC_1
264:268
PVTSS
SPOP
0.9888
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1387:1391
PVTSS
SPOP
0.9755
More...
Q01543
Friend leukemia integration 1 transcription factor
DEG_SPOP_SBC_1
409:413
PVTSS
SPOP
0.9612
More...
Q12948
Forkhead box protein C1
DEG_SPOP_SBC_1
435:439
PVTSS
SPOP
0.9931
More...
Q13029
PR domain zinc finger protein 2
DEG_SPOP_SBC_1
727:731
PVTSS
SPOP
0.9999
More...
Q685J3
Mucin-17
DEG_SPOP_SBC_1
3945:3949
PVTSS
SPOP
0.9405
More...
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
DEG_SPOP_SBC_1
372:376
PVTSS
SPOP
0.9626
More...
Q8NHV4
Protein NEDD1
DEG_SPOP_SBC_1
449:453
PVTSS
SPOP
0.9326
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
479:483
PVTSS
SPOP
0.9957
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
5089:5093
PVTSS
SPOP
0.9713
More...
Q9H4E7
Differentially expressed in FDCP 6 homolog
DEG_SPOP_SBC_1
561:565
PVTSS
SPOP
0.9921
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
508:512
PVTSS
SPOP
0.9914
More...
Q9Y253
DNA polymerase eta
DEG_SPOP_SBC_1
455:459
PVTSS
SPOP
0.7281
More...
Q9Y458
T-box transcription factor TBX22
DEG_SPOP_SBC_1
324:328
PVTSS
SPOP
0.753
More...
Q2VYF4
LETM1 domain-containing protein LETM2, mitochondrial
DEG_SPOP_SBC_1
446:450
PVTSS
SPOP
0.9775
More...
Q8ND82
Zinc finger protein 280C
DEG_SPOP_SBC_1
211:215
PVTSS
SPOP
0.805
More...
Q9BZI1
Iroquois-class homeodomain protein IRX-2
DEG_SPOP_SBC_1
282:286
PVTSS
SPOP
0.9926
More...
Q3LI83
Keratin-associated protein 24-1
DEG_SPOP_SBC_1
27:31
PVTSS
SPOP
0.9114
More...
Q2M243
Coiled-coil domain-containing protein 27
DEG_SPOP_SBC_1
211:215
PVTSS
SPOP
0.6822
More...
Q8NCT3
Uncharacterized protein KIAA0895
DEG_SPOP_SBC_1
157:161
PVTSS
SPOP
0.9394
More...