DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSSST
Uniprot ID:
O95935
Source protein:
T-box transcription factor TBX18
Source gene:
TBX18
Class:
DEG_SPOP_SBC_1
Location:
460:464
E3 ligase:
SPOP
DEGRON score:
0.9891
ASA_SCORE:
60.82
COIL:
0.9358
CONS_SCORE:
0.4813
DSS_SCORE:
0.5104
HELIX:
0.0318
FCONS_SCORE:
0.9034
RIG_SCORE:
0.6687
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V458L
TCGA-21-1076
LUSC
TCGA
VSSST
DEG_SPOP_SBC_1
0.2778
p.V458L
DO26599
LUSC
ICGC
VSSST
DEG_SPOP_SBC_1
0.2778
p.G459A
TCGA-62-A471
LUAD
TCGA
VSSST
DEG_SPOP_SBC_1
0.3056
p.G459A
DO45347
LUAD
ICGC
VSSST
DEG_SPOP_SBC_1
0.3056
p.R453K
TCGA-73-4675
LUAD
TCGA
VSSST
DEG_SPOP_SBC_1
0.1389
p.R453K
TCGA-GS-A9TQ
DLBC
TCGA
VSSST
DEG_SPOP_SBC_1
0.1389
p.R453K
DO219911
DLBC
ICGC
VSSST
DEG_SPOP_SBC_1
0.1389
p.R453K
DO23598
LUAD
ICGC
VSSST
DEG_SPOP_SBC_1
0.1389
p.M470I
TCGA-90-A4ED
LUSC
TCGA
VSSST
DEG_SPOP_SBC_1
0.1667
p.M470I
DO45482
LUSC
ICGC
VSSST
DEG_SPOP_SBC_1
0.1667
p.V460M
TCGA-AC-A6NO
BRCA
TCGA
VSSST
DEG_SPOP_SBC_1
0.7208
p.V460M
TCGA-EO-A22U
UCEC
TCGA
VSSST
DEG_SPOP_SBC_1
0.7208
p.V460M
DO51206
BRCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.7208
p.V460M
DO43755
UCEC
ICGC
VSSST
DEG_SPOP_SBC_1
0.7208
p.Y457F
TCGA-BF-A5EP
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.25
p.Y457F
DO223906
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.25
p.Y457N
TCGA-CG-4476
STAD
TCGA
VSSST
DEG_SPOP_SBC_1
0.25
p.Y457N
DO38276
STAD
ICGC
VSSST
DEG_SPOP_SBC_1
0.25
p.P451T
TCGA-EE-A183
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.0833
p.P451T
DO37715
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.0833
p.V466L
TCGA-OR-A5KB
ACC
TCGA
VSSST
DEG_SPOP_SBC_1
0.2778
p.P455L
DO220882
MELA
ICGC
VSSST
DEG_SPOP_SBC_1
0.1944
p.V466M
SIDM00193
Colorectal Carcinoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.2778
p.V466M
ACH-000991
Colon/Colorectal Cancer
CCLE
VSSST
DEG_SPOP_SBC_1
0.2778
p.V466M
SNU-81
large_intestine
COSMIC
VSSST
DEG_SPOP_SBC_1
0.2778
p.T464P
SIDM00337
Melanoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.7031
p.A450S
SIDM00490
Glioma
GDSC
VSSST
DEG_SPOP_SBC_1
0.0556
p.A450S
ACH-001016
Brain Cancer
CCLE
VSSST
DEG_SPOP_SBC_1
0.0556
p.A450S
Becker
central_nervous_system
COSMIC
VSSST
DEG_SPOP_SBC_1
0.0556
Drug responses associated with TBX18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60237
Protein phosphatase 1 regulatory subunit 12B
DEG_SPOP_SBC_1
574:578
VSSST
SPOP
0.9726
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2573:2577
VSSST
SPOP
0.768
More...
O75496
Geminin
DEG_SPOP_SBC_1
199:203
VSSST
SPOP
0.9991
More...
O95935
T-box transcription factor TBX18
DEG_SPOP_SBC_1
460:464
VSSST
SPOP
0.9891
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1797:1801
VSSST
SPOP
0.9347
More...
Q12951
Forkhead box protein I1
DEG_SPOP_SBC_1
222:226
VSSST
SPOP
0.9895
More...
Q13433
Zinc transporter ZIP6
DEG_SPOP_SBC_1
218:222
VSSST
SPOP
0.9963
More...
Q13516
Oligodendrocyte transcription factor 2
DEG_SPOP_SBC_1
39:43
VSSST
SPOP
0.9992
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
4029:4033
VSSST
SPOP
0.5866
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
5734:5738
VSSST
SPOP
0.9977
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2933:2937
VSSST
SPOP
0.996
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
1005:1009
VSSST
SPOP
0.9988
More...
Q8NEZ2
Vacuolar protein sorting-associated protein 37A
DEG_SPOP_SBC_1
179:183
VSSST
SPOP
0.9741
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
835:839
VSSST
SPOP
0.9941
More...
Q96IZ0
PRKC apoptosis WT1 regulator protein
DEG_SPOP_SBC_1
263:267
VSSST
SPOP
0.7604
More...
Q9P1A6
Disks large-associated protein 2
DEG_SPOP_SBC_1
155:159
VSSST
SPOP
0.9548
More...
Q9UJT9
F-box/LRR-repeat protein 7
DEG_SPOP_SBC_1
23:27
VSSST
SPOP
0.9977
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_SPOP_SBC_1
659:663
VSSST
SPOP
0.9709
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
365:369
VSSST
SPOP
0.9057
More...