DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VSSST
Uniprot ID:
Q8WWM7
Source protein:
Ataxin-2-like protein
Source gene:
ATXN2L
Class:
DEG_SPOP_SBC_1
Location:
835:839
E3 ligase:
SPOP
DEGRON score:
0.9941
ASA_SCORE:
77.7
COIL:
0.9532
CONS_SCORE:
0.2871
DSS_SCORE:
0.6526
HELIX:
0.0144
FCONS_SCORE:
0.8455
RIG_SCORE:
0.6114
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H830Y
TCGA-D3-A8GI
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.1944
p.H830Y
DO50284
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.1944
p.P843L
TCGA-EE-A3J3
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.2222
p.P843L
DO48652
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.2222
p.G828A
DO8898
COAD
ICGC
VSSST
DEG_SPOP_SBC_1
0.1389
p.T826M
DO222794
COCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.0833
p.P848L
DO229054
LICA
ICGC
VSSST
DEG_SPOP_SBC_1
0.0833
p.S844A
SIDM00845
Burkitt's Lymphoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.1944
p.Q841R
SIDM00901
Endometrial Carcinoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.2778
p.Q841R
AN3-CA
endometrium
COSMIC
VSSST
DEG_SPOP_SBC_1
0.2778
p.Q847R
ACH-000940
Endometrial/Uterine Cancer
CCLE
VSSST
DEG_SPOP_SBC_1
0.1111
p.Q847R
AN3-CA
endometrium
COSMIC
VSSST
DEG_SPOP_SBC_1
0.1111
p.P828T
ACH-001068
Lymphoma
CCLE
VSSST
DEG_SPOP_SBC_1
0.1389
p.R829H
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
VSSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with ATXN2L mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60237
Protein phosphatase 1 regulatory subunit 12B
DEG_SPOP_SBC_1
574:578
VSSST
SPOP
0.9726
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2573:2577
VSSST
SPOP
0.768
More...
O75496
Geminin
DEG_SPOP_SBC_1
199:203
VSSST
SPOP
0.9991
More...
O95935
T-box transcription factor TBX18
DEG_SPOP_SBC_1
460:464
VSSST
SPOP
0.9891
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1797:1801
VSSST
SPOP
0.9347
More...
Q12951
Forkhead box protein I1
DEG_SPOP_SBC_1
222:226
VSSST
SPOP
0.9895
More...
Q13433
Zinc transporter ZIP6
DEG_SPOP_SBC_1
218:222
VSSST
SPOP
0.9963
More...
Q13516
Oligodendrocyte transcription factor 2
DEG_SPOP_SBC_1
39:43
VSSST
SPOP
0.9992
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
4029:4033
VSSST
SPOP
0.5866
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
5734:5738
VSSST
SPOP
0.9977
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2933:2937
VSSST
SPOP
0.996
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
1005:1009
VSSST
SPOP
0.9988
More...
Q8NEZ2
Vacuolar protein sorting-associated protein 37A
DEG_SPOP_SBC_1
179:183
VSSST
SPOP
0.9741
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
835:839
VSSST
SPOP
0.9941
More...
Q96IZ0
PRKC apoptosis WT1 regulator protein
DEG_SPOP_SBC_1
263:267
VSSST
SPOP
0.7604
More...
Q9P1A6
Disks large-associated protein 2
DEG_SPOP_SBC_1
155:159
VSSST
SPOP
0.9548
More...
Q9UJT9
F-box/LRR-repeat protein 7
DEG_SPOP_SBC_1
23:27
VSSST
SPOP
0.9977
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_SPOP_SBC_1
659:663
VSSST
SPOP
0.9709
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
365:369
VSSST
SPOP
0.9057
More...