DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VSSST
Uniprot ID:
Q5CZC0
Source protein:
Fibrous sheath-interacting protein 2
Source gene:
FSIP2
Class:
DEG_SPOP_SBC_1
Location:
5734:5738
E3 ligase:
SPOP
DEGRON score:
0.9977
ASA_SCORE:
74.14
COIL:
0.8444
CONS_SCORE:
0.5094
DSS_SCORE:
0.5559
HELIX:
0.0956
FCONS_SCORE:
0.9877
RIG_SCORE:
0.6348
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K5724N
TCGA-44-2662
LUAD
TCGA
VSSST
DEG_SPOP_SBC_1
0.0556
p.D5748N
TCGA-BF-AAP4
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.0556
p.D5748N
DO229446
SKCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.0556
p.D5748N
DO219468
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.0556
p.E5744K
TCGA-BT-A20J
BLCA
TCGA
VSSST
DEG_SPOP_SBC_1
0.1667
p.E5744K
DO457
BLCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.1667
p.R5739G
TCGA-D6-A4ZB
HNSC
TCGA
VSSST
DEG_SPOP_SBC_1
0.3056
p.R5739G
DO44446
HNSC
ICGC
VSSST
DEG_SPOP_SBC_1
0.3056
p.R5739Q
TCGA-DK-A6AW
BLCA
TCGA
VSSST
DEG_SPOP_SBC_1
0.3056
p.R5739Q
TCGA-EE-A3JD
SKCM
TCGA
VSSST
DEG_SPOP_SBC_1
0.3056
p.R5739Q
DO48566
BLCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.3056
p.R5739Q
DO50299
SKCM
ICGC
VSSST
DEG_SPOP_SBC_1
0.3056
p.L5727I
TCGA-DK-AA6R
BLCA
TCGA
VSSST
DEG_SPOP_SBC_1
0.1389
p.L5727I
TCGA-EY-A215
UCEC
TCGA
VSSST
DEG_SPOP_SBC_1
0.1389
p.L5727I
TCGA-GR-A4D9
DLBC
TCGA
VSSST
DEG_SPOP_SBC_1
0.1389
p.T5731A
TCGA-EO-A3AV
UCEC
TCGA
VSSST
DEG_SPOP_SBC_1
0.25
p.T5731A
DO52412
UCEC
ICGC
VSSST
DEG_SPOP_SBC_1
0.25
p.N5743I
TCGA-HU-8249
STAD
TCGA
VSSST
DEG_SPOP_SBC_1
0.1944
p.S5737L
DO219080
HNSC
ICGC
VSSST
DEG_SPOP_SBC_1
0.7667
p.E5744D
DO229036
LICA
ICGC
VSSST
DEG_SPOP_SBC_1
0.1667
p.E5735K
DO229453
SKCA
ICGC
VSSST
DEG_SPOP_SBC_1
0.7022
p.S5728P
SIDM00262
Ewing's Sarcoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.1667
p.S5728P
ACH-002107
Bone Cancer
CCLE
VSSST
DEG_SPOP_SBC_1
0.1667
p.S5728P
ES6
bone
COSMIC
VSSST
DEG_SPOP_SBC_1
0.1667
p.T5738A
SIDM01007
T-Lymphoblastic Leukemia
GDSC
VSSST
DEG_SPOP_SBC_1
0.7139
p.T5738A
ACH-002256
Leukemia
CCLE
VSSST
DEG_SPOP_SBC_1
0.7139
p.T5738A
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
VSSST
DEG_SPOP_SBC_1
0.7139
p.K5733I
SIDM00539
Esophageal Carcinoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.75
p.K5733I
SIDM00954
Breast Carcinoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.75
p.K5733I
SIDM01140
Ovarian Carcinoma
GDSC
VSSST
DEG_SPOP_SBC_1
0.75
Drug responses associated with FSIP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VSSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60237
Protein phosphatase 1 regulatory subunit 12B
DEG_SPOP_SBC_1
574:578
VSSST
SPOP
0.9726
More...
O75179
Ankyrin repeat domain-containing protein 17
DEG_SPOP_SBC_1
2573:2577
VSSST
SPOP
0.768
More...
O75496
Geminin
DEG_SPOP_SBC_1
199:203
VSSST
SPOP
0.9991
More...
O95935
T-box transcription factor TBX18
DEG_SPOP_SBC_1
460:464
VSSST
SPOP
0.9891
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1797:1801
VSSST
SPOP
0.9347
More...
Q12951
Forkhead box protein I1
DEG_SPOP_SBC_1
222:226
VSSST
SPOP
0.9895
More...
Q13433
Zinc transporter ZIP6
DEG_SPOP_SBC_1
218:222
VSSST
SPOP
0.9963
More...
Q13516
Oligodendrocyte transcription factor 2
DEG_SPOP_SBC_1
39:43
VSSST
SPOP
0.9992
More...
Q2LD37
Transmembrane protein KIAA1109
DEG_SPOP_SBC_1
4029:4033
VSSST
SPOP
0.5866
More...
Q5CZC0
Fibrous sheath-interacting protein 2
DEG_SPOP_SBC_1
5734:5738
VSSST
SPOP
0.9977
More...
Q5T4S7
E3 ubiquitin-protein ligase UBR4
DEG_SPOP_SBC_1
2933:2937
VSSST
SPOP
0.996
More...
Q5T6F2
Ubiquitin-associated protein 2
DEG_SPOP_SBC_1
1005:1009
VSSST
SPOP
0.9988
More...
Q8NEZ2
Vacuolar protein sorting-associated protein 37A
DEG_SPOP_SBC_1
179:183
VSSST
SPOP
0.9741
More...
Q8WWM7
Ataxin-2-like protein
DEG_SPOP_SBC_1
835:839
VSSST
SPOP
0.9941
More...
Q96IZ0
PRKC apoptosis WT1 regulator protein
DEG_SPOP_SBC_1
263:267
VSSST
SPOP
0.7604
More...
Q9P1A6
Disks large-associated protein 2
DEG_SPOP_SBC_1
155:159
VSSST
SPOP
0.9548
More...
Q9UJT9
F-box/LRR-repeat protein 7
DEG_SPOP_SBC_1
23:27
VSSST
SPOP
0.9977
More...
Q9Y6Q9
Nuclear receptor coactivator 3
DEG_SPOP_SBC_1
659:663
VSSST
SPOP
0.9709
More...
Q9H195
Mucin-3B
DEG_SPOP_SBC_1
365:369
VSSST
SPOP
0.9057
More...