DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
VVSST
Uniprot ID:
O43294
Source protein:
Transforming growth factor beta-1-induced transcript 1 protein
Source gene:
TGFB1I1
Class:
DEG_SPOP_SBC_1
Location:
184:188
E3 ligase:
SPOP
DEGRON score:
0.9948
ASA_SCORE:
85.88
COIL:
0.9182
CONS_SCORE:
0.4095
DSS_SCORE:
0.8257
HELIX:
0.0304
FCONS_SCORE:
1.0476
RIG_SCORE:
0.584
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P183L
TCGA-38-4625
LUAD
TCGA
VVSST
DEG_SPOP_SBC_1
0.3056
p.S186R
TCGA-DD-AADQ
LIHC
TCGA
VVSST
DEG_SPOP_SBC_1
0.7427
p.P195T
TCGA-EE-A2GO
SKCM
TCGA
VVSST
DEG_SPOP_SBC_1
0.1389
p.D197N
DO10880
GBM
ICGC
VVSST
DEG_SPOP_SBC_1
0.0833
p.G183V
DO228948
LICA
ICGC
VVSST
DEG_SPOP_SBC_1
0.3056
p.G183V
DO228985
LICA
ICGC
VVSST
DEG_SPOP_SBC_1
0.3056
p.G174A
DO231179
LUSC
ICGC
VVSST
DEG_SPOP_SBC_1
0.0556
p.Q195H
DO26934
LUSC
ICGC
VVSST
DEG_SPOP_SBC_1
0.1389
p.S186T
DO219182
LUSC
ICGC
VVSST
DEG_SPOP_SBC_1
0.6005
p.S196F
DO46478
OV
ICGC
VVSST
DEG_SPOP_SBC_1
0.1111
p.G185D
DO36293
PRAD
ICGC
VVSST
DEG_SPOP_SBC_1
0.7198
p.G185D
DO38404
STAD
ICGC
VVSST
DEG_SPOP_SBC_1
0.7198
p.P178T
DO37823
SKCM
ICGC
VVSST
DEG_SPOP_SBC_1
0.1667
Drug responses associated with TGFB1I1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of VVSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43294
Transforming growth factor beta-1-induced transcript 1 protein
DEG_SPOP_SBC_1
184:188
VVSST
SPOP
0.9948
More...
P16144
Integrin beta-4
DEG_SPOP_SBC_1
1230:1234
VVSST
SPOP
0.5329
More...
P21583
Kit ligand
DEG_SPOP_SBC_1
164:168
VVSST
SPOP
0.9767
More...
P51003
Poly
DEG_SPOP_SBC_1
615:619
VVSST
SPOP
0.7739
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1337:1341
VVSST
SPOP
0.7602
More...
Q12830
Nucleosome-remodeling factor subunit BPTF
DEG_SPOP_SBC_1
1739:1743
VVSST
SPOP
0.9233
More...
Q14241
Elongin-A
DEG_SPOP_SBC_1
763:767
VVSST
SPOP
0.7077
More...
Q8N573
Oxidation resistance protein 1
DEG_SPOP_SBC_1
199:203
VVSST
SPOP
0.9992
More...
Q96B97
SH3 domain-containing kinase-binding protein 1
DEG_SPOP_SBC_1
469:473
VVSST
SPOP
0.9973
More...
Q9BXR0
Queuine tRNA-ribosyltransferase catalytic subunit 1
DEG_SPOP_SBC_1
161:165
VVSST
SPOP
0.5555
More...
Q9HCP0
Casein kinase I isoform gamma-1
DEG_SPOP_SBC_1
370:374
VVSST
SPOP
0.9967
More...
Q9NYB9
Abl interactor 2
DEG_SPOP_SBC_1
337:341
VVSST
SPOP
0.9646
More...
Q9Y6M4
Casein kinase I isoform gamma-3
DEG_SPOP_SBC_1
395:399
VVSST
SPOP
0.9966
More...
Q9NRJ5
Poly
DEG_SPOP_SBC_1
614:618
VVSST
SPOP
0.8298
More...
Q8NEM2
SHC SH2 domain-binding protein 1
DEG_SPOP_SBC_1
334:338
VVSST
SPOP
0.5138
More...