Search results: The pahtway p2592 has 88 genes in the original annotation. Currently, there are 63 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
6387CXCL12IRH | PBSF | SCYB12 | SDF1 | TLSF | TPAR1C-X-C motif chemokine ligand 1210q11.1CV:GWAScat
CV:GWASdb
CV:PGCnp
Expression
PMID:cooccur
657BMPR1A10q23del | ACVRLK3 | ALK3 | CD292 | SKR5bone morphogenetic protein receptor type 1A10q22.3CV:PGCnp
27250PDCD4H731programmed cell death 4 (neoplastic transformation inhibitor)10q24DMG:Jaffe_2016
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
6811STX5SED5 | STX5Asyntaxin 511q12.3CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
INTRACELLULAR TRAFFICKING
26973CHORDC1CHP1cysteine and histidine rich domain containing 111q14.3CV:PGCnp
DMG:Wockner_2014
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
64221ROBO3HGPPS | HGPS | RBIG1 | RIG1roundabout guidance receptor 311q24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
225ABCD2ABC39 | ALDL1 | ALDR | ALDRP | hALDRATP binding cassette subfamily D member 212q12CV:PGCnp
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
1407CRY1PHLL1cryptochrome circadian clock 112q23-q24.1CV:PGCnp
PMID:cooccur
10808HSPH1HSP105 | HSP105A | HSP105B | NY-CO-25heat shock protein family H (Hsp110) member 113q12.3CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
8428STK24HEL-S-95 | MST3 | MST3B | STE20 | STK3serine/threonine kinase 2413q31.2-q32.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
8788DLK1DLK | DLK-1 | Delta1 | FA1 | PREF1 | Pref-1 | ZOG | pG2delta-like 1 homolog (Drosophila)14q32CV:PGCnp
PMID:cooccur
27229TUBGCP476P | GCP-4 | GCP4 | Grip76 | MCCRP3tubulin gamma complex associated protein 415q15CV:PGCnp
51760SYT17sytXVIIsynaptotagmin 1716p12.3CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GO_Annotation
GSMA_IIE
654780SFPQ-splicing factor proline/glutamine-rich16q24.1CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
51655RASD1AGS1 | DEXRAS1 | MGC:26290RAS, dexamethasone-induced 117p11.2CV:PGCnp
DMG:Nishioka_2013
Network
5187PER1PER | RIGUI | hPERperiod circadian clock 117p13.1CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
8522GAS7MLL/GAS7growth arrest specific 717p13.1CV:PGCnp
DMG:Montano_2016
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
Darnell FMRP targets
9135RABEP1RAB5EP | RABPT5rabaptin, RAB GTPase binding effector protein 117p13.2CV:PGCnpINTRACELLULAR TRAFFICKING
G2Cdb.humanPSD
G2Cdb.humanPSP
6354CCL7FIC | MARC | MCP-3 | MCP3 | NC28 | SCYA6 | SCYA7C-C motif chemokine ligand 717q11.2-q12Network
PMID:cooccur
6774STAT3ADMIO | APRF | HIESsignal transducer and activator of transcription 3 (acute-phase response factor)17q21.31CV:PGCnp
CV:PheWAS
DMG:vanEijk_2014
GO_Annotation
Network
PMID:cooccur
4670HNRNPMCEAR | HNRNPM4 | HNRPM | HNRPM4 | HTGR1 | NAGR1 | hnRNP Mheterogeneous nuclear ribonucleoprotein M19p13.2CV:PGCnp
DEG:Maycox_2009
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
Ascano FMRP targets
3337DNAJB1HSPF1 | Hdj1 | Hsp40 | RSPH16B | Sis1DnaJ heat shock protein family (Hsp40) member B119p13.2CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5434POLR2ERPABC1 | RPB5 | XAP4 | hRPB25 | hsRPB5polymerase (RNA) II subunit E19p13.3CV:PGCnp
4616GADD45BGADD45BETA | MYD118growth arrest and DNA damage inducible beta19p13.3CV:PGCnp
PMID:cooccur
1628DBPDABPD site of albumin promoter (albumin D-box) binding protein19q13.3CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
1647GADD45ADDIT1 | GADD45growth arrest and DNA damage inducible alpha1p31.2CV:GWASdb
CV:PGCnp
GSMA_IIA
6421SFPQPOMP100 | PPP1R140 | PSFsplicing factor proline/glutamine-rich1p34.3CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
9967THRAP3TRAP150thyroid hormone receptor associated protein 31p34.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
Ascano FMRP targets
6004RGS16A28-RGS14 | A28-RGS14P | RGS-Rregulator of G-protein signaling 161q25-q31CV:PGCnp
Network
PMID:cooccur
551AVPADH | ARVP | AVP-NPII | AVRP | VParginine vasopressin20p13PMID:cooccurNEUROTROPHIN SIGNALING
10904BLCAPBC10bladder cancer associated protein20q11.23CV:PGCnp
DMG:Jaffe_2016
6431SRSF6B52 | HEL-S-91 | SFRS6 | SRP55serine/arginine-rich splicing factor 620q12-q13.1CV:PGCnp
Expression
6185RPN2RIBIIR | RPN-II | RPNII | SWP1ribophorin II20q12-q13.1CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
51807TUBA8TUBAL2tubulin alpha 822q11.1Association
CV:PGCnp
GSMA_I
PMID:cooccur
7494XBP1TREB-5 | TREB5 | XBP-1 | XBP2X-box binding protein 122q12.1|22q12Association
CV:PGCnp
DEG:Sanders_2013
DMG:Jaffe_2016
GR_Ng
GR_WM
GSMA_I
PMID:cooccur
10130PDIA6ERP5 | P5 | TXNDC7protein disulfide isomerase family A member 62p25.1CV:PGCnpRNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
94101ORMDL1-ORMDL sphingolipid biosynthesis regulator 12q32CV:PGCnp
DMG:Jaffe_2016
DNM:Guipponi_2014
3329HSPD1CPN60 | GROEL | HLD4 | HSP-60 | HSP60 | HSP65 | HuCHA60 | SPG13heat shock protein family D (Hsp60) member 12q33.1CV:PGCnp
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
8864PER2FASPS | FASPS1period circadian clock 22q37.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
7873MANFARMET | ARPmesencephalic astrocyte derived neurotrophic factor3p21.1CV:PGCnp
DMG:Jaffe_2016
65997RASL11B-RAS like family 11 member B4q12CV:PGCnp
DMG:Wockner_2014
6423SFRP2FRP-2 | SARP1 | SDF-5secreted frizzled-related protein 24q31.3CV:PGCnp
134147CMBLJS-1carboxymethylenebutenolidase homolog (Pseudomonas)5p15.2CV:PGCnp
DMG:Wockner_2014
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
4124MAN2A1AMan II | GOLIM7 | MANA2 | MANIImannosidase alpha class 2A member 15q21.3CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
3123HLA-DRB1DRB1 | DRw10 | HLA-DR1B | HLA-DRB | SS1major histocompatibility complex, class II, DR beta 16p21.3CV:GWAScat
CV:GWASdb
CV:PGCnp
GSMA_I
PMID:cooccur
3303HSPA1AHEL-S-103 | HSP70-1 | HSP70-1A | HSP70.1 | HSP70I | HSP72 | HSPA1heat shock protein family A (Hsp70) member 1A6p21.3CV:PGCnp
DMG:Wockner_2014
GSMA_I
Network
PMID:cooccur
3304HSPA1BHSP70-1B | HSP70-2 | HSP70.2heat shock protein family A (Hsp70) member 1B6p21.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanNRC
7918GPANK1ANKRD59 | BAT4 | D6S54E | G5 | GPATCH10G-patch domain and ankyrin repeats 16p21.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
55754TMEM30AC6orf67 | CDC50Atransmembrane protein 30A6q14.1CV:PGCnp
DMG:Jaffe_2016
CELL METABOLISM
594BCKDHBBCKDE1B | BCKDH E1-beta | E1Bbranched chain keto acid dehydrogenase E1, beta polypeptide6q14.1CV:PGCnp
10957PNRC1B4-2 | PNAS-145 | PROL2 | PRR2proline rich nuclear receptor coactivator 16q15CV:GWASdb
CV:PGCnp
2173FABP7B-FABP | BLBP | FABPB | MRGfatty acid binding protein 76q22-q23Association
CV:PGCnp
GO_Annotation
PMID:cooccur
10924SMPDL3AASM3A | ASML3a | yR36GH4.1sphingomyelin phosphodiesterase acid like 3A6q22.31CV:PGCnp
DMG:Nishioka_2013
5570PKIBPRKACN2protein kinase (cAMP-dependent, catalytic) inhibitor beta6q22.31CV:PGCnp
DMG:Wockner_2014
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
83595SOX7-SRY-box 78p23.1CV:PGCnpG2Cdb.humanPSD
G2Cdb.humanPSP
6713SQLE-squalene epoxidase8q24.1CV:PGCnp
DNM:Fromer_2014
CompositeSet
3309HSPA5BIP | GRP78 | HEL-S-89n | MIF2heat shock protein family A (Hsp70) member 59q33.3CV:PGCnp
Network
PMID:cooccur
RNA AND PROTEIN SYNTHESIS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Ascano FMRP targets
64975MRPL41BMRP | MRP-L27 | MRPL27 | PIG3 | RPML27mitochondrial ribosomal protein L419q34.3DMG:Wockner_2014