DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
AATSS
Uniprot ID:
Q15345
Source protein:
Leucine-rich repeat-containing protein 41
Source gene:
LRRC41
Class:
DEG_SPOP_SBC_1
Location:
362:366
E3 ligase:
SPOP
DEGRON score:
0.9096
ASA_SCORE:
73.86
COIL:
0.8024
CONS_SCORE:
0.3461
DSS_SCORE:
0.6691
HELIX:
0.1584
FCONS_SCORE:
0.6448
RIG_SCORE:
0.5192
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R356L
TCGA-09-2044
OV
TCGA
AATSS
DEG_SPOP_SBC_1
0.1667
p.R356L
DO28923
OV
ICGC
AATSS
DEG_SPOP_SBC_1
0.1667
p.R356W
TCGA-DF-A2KU
UCEC
TCGA
AATSS
DEG_SPOP_SBC_1
0.1667
p.R356W
TCGA-E7-A541
BLCA
TCGA
AATSS
DEG_SPOP_SBC_1
0.1667
p.R356W
DO44037
BLCA
ICGC
AATSS
DEG_SPOP_SBC_1
0.1667
p.R356W
DO223286
UCEC
ICGC
AATSS
DEG_SPOP_SBC_1
0.1667
p.R376Q
TCGA-HU-A4GQ
STAD
TCGA
AATSS
DEG_SPOP_SBC_1
0.0556
p.R376Q
DO47767
STAD
ICGC
AATSS
DEG_SPOP_SBC_1
0.0556
p.A362V
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
AATSS
DEG_SPOP_SBC_1
0.5825
p.A362V
ACH-000766
Lung Cancer
CCLE
AATSS
DEG_SPOP_SBC_1
0.5825
p.A362V
NCI-H1648
lung
COSMIC
AATSS
DEG_SPOP_SBC_1
0.5825
p.P361Q
SIDM00290
Gastric Carcinoma
GDSC
AATSS
DEG_SPOP_SBC_1
0.3056
p.P361Q
ACH-000847
Gastric Cancer
CCLE
AATSS
DEG_SPOP_SBC_1
0.3056
p.P361Q
HGC-27
stomach
COSMIC
AATSS
DEG_SPOP_SBC_1
0.3056
p.A352T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
AATSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with LRRC41 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of AATSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43166
Signal-induced proliferation-associated 1-like protein 1
DEG_SPOP_SBC_1
1345:1349
AATSS
SPOP
0.9959
More...
P30414
NK-tumor recognition protein
DEG_SPOP_SBC_1
1240:1244
AATSS
SPOP
0.574
More...
P51575
P2X purinoceptor 1
DEG_SPOP_SBC_1
384:388
AATSS
SPOP
0.9498
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3473:3477
AATSS
SPOP
0.9561
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3906:3910
AATSS
SPOP
0.9778
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4212:4216
AATSS
SPOP
0.9754
More...
Q02447
Transcription factor Sp3
DEG_SPOP_SBC_1
132:136
AATSS
SPOP
0.6351
More...
Q08188
Protein-glutamine gamma-glutamyltransferase E
DEG_SPOP_SBC_1
467:471
AATSS
SPOP
0.503
More...
Q15345
Leucine-rich repeat-containing protein 41
DEG_SPOP_SBC_1
362:366
AATSS
SPOP
0.9096
More...
Q4LE39
AT-rich interactive domain-containing protein 4B
DEG_SPOP_SBC_1
1272:1276
AATSS
SPOP
0.8855
More...
Q5HY92
Fidgetin
DEG_SPOP_SBC_1
449:453
AATSS
SPOP
0.623
More...
Q75QN2
Integrator complex subunit 8
DEG_SPOP_SBC_1
10:14
AATSS
SPOP
0.8854
More...
Q7L2J0
7SK snRNA methylphosphate capping enzyme
DEG_SPOP_SBC_1
73:77
AATSS
SPOP
0.9873
More...
Q86V15
Zinc finger protein castor homolog 1
DEG_SPOP_SBC_1
217:221
AATSS
SPOP
0.9362
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
1067:1071
AATSS
SPOP
0.625
More...
Q99683
Mitogen-activated protein kinase kinase kinase 5
DEG_SPOP_SBC_1
69:73
AATSS
SPOP
0.9979
More...
Q9C0D5
Protein TANC1
DEG_SPOP_SBC_1
315:319
AATSS
SPOP
0.9995
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
2727:2731
AATSS
SPOP
0.9343
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3427:3431
AATSS
SPOP
0.9499
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
3984:3988
AATSS
SPOP
0.9705
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
4717:4721
AATSS
SPOP
0.9583
More...
Q9HCD6
Protein TANC2
DEG_SPOP_SBC_1
270:274
AATSS
SPOP
0.7398
More...
Q9UNY4
Transcription termination factor 2
DEG_SPOP_SBC_1
347:351
AATSS
SPOP
0.8523
More...
Q9Y6C5
Protein patched homolog 2
DEG_SPOP_SBC_1
1186:1190
AATSS
SPOP
0.9776
More...
Q96M27
Protein PRRC1
DEG_SPOP_SBC_1
35:39
AATSS
SPOP
0.8538
More...
Q8TC56
Golgi associated RAB2 interactor protein 3
DEG_SPOP_SBC_1
225:229
AATSS
SPOP
0.8742
More...
A6NF01
Putative nuclear envelope pore membrane protein POM 121B
DEG_SPOP_SBC_1
652:656
AATSS
SPOP
0.8671
More...
O43304
SEC14-like protein 5
DEG_SPOP_SBC_1
678:682
AATSS
SPOP
0.7971
More...
Q5JV73
FERM and PDZ domain-containing protein 3
DEG_SPOP_SBC_1
949:953
AATSS
SPOP
0.9369
More...
Q8TB05
UBA-like domain-containing protein 1
DEG_SPOP_SBC_1
114:118
AATSS
SPOP
0.6952
More...
Q9BXQ6
Transmembrane protein 121B
DEG_SPOP_SBC_1
117:121
AATSS
SPOP
0.9763
More...
Q9UNZ5
Leydig cell tumor 10 kDa protein homolog
DEG_SPOP_SBC_1
91:95
AATSS
SPOP
0.9522
More...