DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSST
Uniprot ID:
P51617
Source protein:
Interleukin-1 receptor-associated kinase 1
Source gene:
IRAK1
Class:
DEG_SPOP_SBC_1
Location:
175:179
E3 ligase:
SPOP
DEGRON score:
0.9726
ASA_SCORE:
82.86
COIL:
0.9486
CONS_SCORE:
0.3402
DSS_SCORE:
0.6822
HELIX:
0.0272
FCONS_SCORE:
1.0712
RIG_SCORE:
0.4968
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P169A
TCGA-A6-2683
COAD
TCGA
APSST
DEG_SPOP_SBC_1
0.1667
p.V187M
TCGA-DD-A3A9
LIHC
TCGA
APSST
DEG_SPOP_SBC_1
0.1111
p.P182R
DO219078
BLCA
ICGC
APSST
DEG_SPOP_SBC_1
0.25
p.A172D
DO229041
LICA
ICGC
APSST
DEG_SPOP_SBC_1
0.25
p.P174L
DO31779
OV
ICGC
APSST
DEG_SPOP_SBC_1
0.3056
p.T178S
RH-41
soft_tissue
COSMIC
APSST
DEG_SPOP_SBC_1
0.7116
p.P188S
UACC-893
breast
COSMIC
APSST
DEG_SPOP_SBC_1
0.0833
Drug responses associated with IRAK1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00749
LUAD|lung_NSCLC_adenocarcinoma
p.E393K (No)
GDSC
WZ3105
16.7536
SIDM00095
GBM|glioma
p.R366C (No)
GDSC
WZ3105
0.6666
SIDM00932
KIRC|kidney
p.V642M (No)
GDSC
WZ3105
4.9105
SIDM00651
UNCLASSIFIED|lung_NSCLC_large_cell
p.P658L (No)
GDSC
WZ3105
24.2807
SIDM00212
GBM|glioma
p.V642M (No)
GDSC
WZ3105
0.9105
SIDM01090
COREAD|large_intestine
p.C203S (No)
GDSC
WZ3105
0.2097
SIDM00529
BRCA|breast
p.P173L (Yes)
GDSC
WZ3105
0.5606
SIDM00756
LUAD|lung_NSCLC_adenocarcinoma
p.S690G (No)
GDSC
WZ3105
25.4931
SIDM01186
BRCA|breast
p.P162S (No)
GDSC
WZ3105
0.4924
SIDM00530
ESCA|oesophagus
p.V586M (No)
GDSC
WZ3105
0.5288
SIDM00217
COREAD|large_intestine
p.L437P (No)
GDSC
WZ3105
0.1618
SIDM00807
BLCA|bladder
p.P173L (Yes)
GDSC
WZ3105
0.2911
SIDM00396
LAML|acute_myeloid_leukaemia
p.R366C (No)
GDSC
WZ3105
0.0764
SIDM00274
STAD|stomach
p.E516K (No)
GDSC
WZ3105
18.5283
SIDM00426
UNCLASSIFIED|rhabdomyosarcoma
p.T152S (No)
GDSC
WZ3105
0.5116
SIDM00567
MB|medulloblastoma
p.V188F (Yes)
GDSC
WZ3105
0.118
SIDM01140
UNCLASSIFIED|ovary
p.P173L (Yes)
GDSC
WZ3105
0.213
SIDM01113
UNCLASSIFIED|soft_tissue_other
p.R69fs*6 (No)
GDSC
WZ3105
1.6705
SIDM01183
UNCLASSIFIED|lung_NSCLC_carcinoid
p.A651V (No)
GDSC
WZ3105
0.7103
SIDM00128
HNSC|head_and_neck
p.G530R (No)
GDSC
WZ3105
0.3456
SIDM01004
LCML|chronic_myeloid_leukaemia
p.L493_G494delLG (No)
GDSC
WZ3105
0.1956
SIDM00382
GBM|glioma
p.P218fs*68 (No)
GDSC
WZ3105
27.5385
SIDM00555
GBM|glioma
p.V586M (No)
GDSC
WZ3105
0.1686
SIDM00092
OV|ovary
p.S607R (No)
GDSC
WZ3105
1.9954
SIDM00048
LUAD|lung_NSCLC_adenocarcinoma
p.R194H (No)
GDSC
WZ3105
0.4596
SIDM00654
SCLC|lung_small_cell_carcinoma
p.R187Q (Yes)
GDSC
WZ3105
0.262
SIDM00579
NB|neuroblastoma
p.D169G (Yes)
GDSC
WZ3105
18.1424
SIDM00118
COREAD|large_intestine
p.V642A (No)
GDSC
WZ3105
0.4527
All proteins holding degron of APSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00468
Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment
DEG_SPOP_SBC_1
1007:1011
APSST
SPOP
0.8779
More...
O14745
Na
DEG_SPOP_SBC_1
310:314
APSST
SPOP
0.9989
More...
O95071
E3 ubiquitin-protein ligase UBR5
DEG_SPOP_SBC_1
1730:1734
APSST
SPOP
0.9784
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
246:250
APSST
SPOP
0.7114
More...
P35637
RNA-binding protein FUS
DEG_SPOP_SBC_1
105:109
APSST
SPOP
0.9597
More...
P46379
Large proline-rich protein BAG6
DEG_SPOP_SBC_1
414:418
APSST
SPOP
0.8466
More...
P48378
DNA-binding protein RFX2
DEG_SPOP_SBC_1
101:105
APSST
SPOP
0.9989
More...
P51617
Interleukin-1 receptor-associated kinase 1
DEG_SPOP_SBC_1
175:179
APSST
SPOP
0.9726
More...
P80723
Brain acid soluble protein 1
DEG_SPOP_SBC_1
192:196
APSST
SPOP
0.9979
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1508:1512
APSST
SPOP
0.9994
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1881:1885
APSST
SPOP
0.9979
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
3235:3239
APSST
SPOP
0.9704
More...
Q14244
Ensconsin
DEG_SPOP_SBC_1
456:460
APSST
SPOP
0.9245
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
1031:1035
APSST
SPOP
0.9833
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1633:1637
APSST
SPOP
0.9841
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1656:1660
APSST
SPOP
0.8455
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
2880:2884
APSST
SPOP
0.9592
More...
Q8N183
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
DEG_SPOP_SBC_1
146:150
APSST
SPOP
0.9957
More...
Q8NC01
C-type lectin domain family 1 member A
DEG_SPOP_SBC_1
42:46
APSST
SPOP
0.6529
More...
Q8NCD3
Holliday junction recognition protein
DEG_SPOP_SBC_1
658:662
APSST
SPOP
0.994
More...
Q96AY4
Tetratricopeptide repeat protein 28
DEG_SPOP_SBC_1
2199:2203
APSST
SPOP
0.9683
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
82:86
APSST
SPOP
0.9637
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2382:2386
APSST
SPOP
0.9772
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1137:1141
APSST
SPOP
0.855
More...
Q9P2K3
REST corepressor 3
DEG_SPOP_SBC_1
397:401
APSST
SPOP
0.8981
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
950:954
APSST
SPOP
0.9976
More...
O75956
Cyclin-dependent kinase 2-associated protein 2
DEG_SPOP_SBC_1
9:13
APSST
SPOP
0.9992
More...
Q9UBL0
cAMP-regulated phosphoprotein 21
DEG_SPOP_SBC_1
458:462
APSST
SPOP
0.708
More...
Q9HCE3
Zinc finger protein 532
DEG_SPOP_SBC_1
730:734
APSST
SPOP
0.9471
More...
A6NHS7
MANSC domain-containing protein 4
DEG_SPOP_SBC_1
173:177
APSST
SPOP
0.9451
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
334:338
APSST
SPOP
0.9671
More...