DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSST
Uniprot ID:
Q6P4R8
Source protein:
Nuclear factor related to kappa-B-binding protein
Source gene:
NFRKB
Class:
DEG_SPOP_SBC_1
Location:
1031:1035
E3 ligase:
SPOP
DEGRON score:
0.9833
ASA_SCORE:
89.26
COIL:
0.9642
CONS_SCORE:
0.3861
DSS_SCORE:
0.5435
HELIX:
0.0092
FCONS_SCORE:
0.971
RIG_SCORE:
0.5235
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S1027T
DO44446
HNSC
ICGC
APSST
DEG_SPOP_SBC_1
0.6667
p.V1044M
DO52085
HNSC
ICGC
APSST
DEG_SPOP_SBC_1
0.0833
p.V1044M
DO222908
MELA
ICGC
APSST
DEG_SPOP_SBC_1
0.0833
p.P1032L
DO22373
LGG
ICGC
APSST
DEG_SPOP_SBC_1
0.6471
p.S1028P
DO22237
LGG
ICGC
APSST
DEG_SPOP_SBC_1
0.25
p.A1031S
DO24547
LUAD
ICGC
APSST
DEG_SPOP_SBC_1
0.7588
p.H1043Y
SIDM00999
Bladder Carcinoma
GDSC
APSST
DEG_SPOP_SBC_1
0.2222
p.H1043Y
639-V
urinary_tract
COSMIC
APSST
DEG_SPOP_SBC_1
0.2222
p.A1024V
ACH-001550
Skin Cancer
CCLE
APSST
DEG_SPOP_SBC_1
0.1389
p.A1024V
MCC13
skin
COSMIC
APSST
DEG_SPOP_SBC_1
0.1389
Drug responses associated with NFRKB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00468
Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment
DEG_SPOP_SBC_1
1007:1011
APSST
SPOP
0.8779
More...
O14745
Na
DEG_SPOP_SBC_1
310:314
APSST
SPOP
0.9989
More...
O95071
E3 ubiquitin-protein ligase UBR5
DEG_SPOP_SBC_1
1730:1734
APSST
SPOP
0.9784
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
246:250
APSST
SPOP
0.7114
More...
P35637
RNA-binding protein FUS
DEG_SPOP_SBC_1
105:109
APSST
SPOP
0.9597
More...
P46379
Large proline-rich protein BAG6
DEG_SPOP_SBC_1
414:418
APSST
SPOP
0.8466
More...
P48378
DNA-binding protein RFX2
DEG_SPOP_SBC_1
101:105
APSST
SPOP
0.9989
More...
P51617
Interleukin-1 receptor-associated kinase 1
DEG_SPOP_SBC_1
175:179
APSST
SPOP
0.9726
More...
P80723
Brain acid soluble protein 1
DEG_SPOP_SBC_1
192:196
APSST
SPOP
0.9979
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1508:1512
APSST
SPOP
0.9994
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1881:1885
APSST
SPOP
0.9979
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
3235:3239
APSST
SPOP
0.9704
More...
Q14244
Ensconsin
DEG_SPOP_SBC_1
456:460
APSST
SPOP
0.9245
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
1031:1035
APSST
SPOP
0.9833
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1633:1637
APSST
SPOP
0.9841
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1656:1660
APSST
SPOP
0.8455
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
2880:2884
APSST
SPOP
0.9592
More...
Q8N183
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
DEG_SPOP_SBC_1
146:150
APSST
SPOP
0.9957
More...
Q8NC01
C-type lectin domain family 1 member A
DEG_SPOP_SBC_1
42:46
APSST
SPOP
0.6529
More...
Q8NCD3
Holliday junction recognition protein
DEG_SPOP_SBC_1
658:662
APSST
SPOP
0.994
More...
Q96AY4
Tetratricopeptide repeat protein 28
DEG_SPOP_SBC_1
2199:2203
APSST
SPOP
0.9683
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
82:86
APSST
SPOP
0.9637
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2382:2386
APSST
SPOP
0.9772
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1137:1141
APSST
SPOP
0.855
More...
Q9P2K3
REST corepressor 3
DEG_SPOP_SBC_1
397:401
APSST
SPOP
0.8981
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
950:954
APSST
SPOP
0.9976
More...
O75956
Cyclin-dependent kinase 2-associated protein 2
DEG_SPOP_SBC_1
9:13
APSST
SPOP
0.9992
More...
Q9UBL0
cAMP-regulated phosphoprotein 21
DEG_SPOP_SBC_1
458:462
APSST
SPOP
0.708
More...
Q9HCE3
Zinc finger protein 532
DEG_SPOP_SBC_1
730:734
APSST
SPOP
0.9471
More...
A6NHS7
MANSC domain-containing protein 4
DEG_SPOP_SBC_1
173:177
APSST
SPOP
0.9451
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
334:338
APSST
SPOP
0.9671
More...