DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
APSST
Uniprot ID:
Q8NC01
Source protein:
C-type lectin domain family 1 member A
Source gene:
CLEC1A
Class:
DEG_SPOP_SBC_1
Location:
42:46
E3 ligase:
SPOP
DEGRON score:
0.6529
ASA_SCORE:
79.22
COIL:
0.8954
CONS_SCORE:
0.7705
DSS_SCORE:
0.3941
HELIX:
0.0838
FCONS_SCORE:
0.9627
RIG_SCORE:
0.6928
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A51T
TCGA-06-0192
GBM
TCGA
APSST
DEG_SPOP_SBC_1
0.1944
p.A51T
DO13420
GBM
ICGC
APSST
DEG_SPOP_SBC_1
0.1944
p.H32Q
TCGA-5P-A9K3
KIRP
TCGA
APSST
DEG_SPOP_SBC_1
0.0556
p.H32Q
DO223948
KIRP
ICGC
APSST
DEG_SPOP_SBC_1
0.0556
p.R37C
TCGA-AP-A056
UCEC
TCGA
APSST
DEG_SPOP_SBC_1
0.1944
p.R37C
TCGA-FI-A2D5
UCEC
TCGA
APSST
DEG_SPOP_SBC_1
0.1944
p.R37C
DO41331
UCEC
ICGC
APSST
DEG_SPOP_SBC_1
0.1944
p.R37C
DO43971
UCEC
ICGC
APSST
DEG_SPOP_SBC_1
0.1944
p.P43L
TCGA-FW-A3R5
SKCM
TCGA
APSST
DEG_SPOP_SBC_1
0.6471
p.P43L
DO37406
SKCM
ICGC
APSST
DEG_SPOP_SBC_1
0.6471
p.P35L
TCGA-GN-A266
SKCM
TCGA
APSST
DEG_SPOP_SBC_1
0.1389
p.P35L
DO37432
SKCM
ICGC
APSST
DEG_SPOP_SBC_1
0.1389
p.Q55E
DO219064
BLCA
ICGC
APSST
DEG_SPOP_SBC_1
0.0833
p.Q55E
ACH-000828
Breast Cancer
CCLE
APSST
DEG_SPOP_SBC_1
0.0833
p.Q55E
ZR-75-30
breast
COSMIC
APSST
DEG_SPOP_SBC_1
0.0833
p.N55S
DO222884
COCA
ICGC
APSST
DEG_SPOP_SBC_1
0.0833
p.W49C
DO228224
LICA
ICGC
APSST
DEG_SPOP_SBC_1
0.25
p.P49Q
DO228948
LICA
ICGC
APSST
DEG_SPOP_SBC_1
0.25
p.S54C
DO49715
LIHC
ICGC
APSST
DEG_SPOP_SBC_1
0.1111
p.P43H
DO50780
LIRI
ICGC
APSST
DEG_SPOP_SBC_1
0.6583
p.T48A
DO218922
LUAD
ICGC
APSST
DEG_SPOP_SBC_1
0.2778
p.Y43F
DO24890
LUAD
ICGC
APSST
DEG_SPOP_SBC_1
0.7528
p.D54G
DO228810
PBCA
ICGC
APSST
DEG_SPOP_SBC_1
0.1111
p.D54G
DO219945
SARC
ICGC
APSST
DEG_SPOP_SBC_1
0.1111
p.Y42F
DO36342
PRAD
ICGC
APSST
DEG_SPOP_SBC_1
0.7528
p.M56V
DO47849
STAD
ICGC
APSST
DEG_SPOP_SBC_1
0.0556
p.D51N
DO41644
UCEC
ICGC
APSST
DEG_SPOP_SBC_1
0.1944
p.V50A
SIDM01130
Squamous Cell Lung Carcinoma
GDSC
APSST
DEG_SPOP_SBC_1
0.2222
p.V50A
ACH-000395
Lung Cancer
CCLE
APSST
DEG_SPOP_SBC_1
0.2222
p.V50A
NCI-H520
lung
COSMIC
APSST
DEG_SPOP_SBC_1
0.2222
p.L52P
SIDM01133
Other Solid Cancers
GDSC
APSST
DEG_SPOP_SBC_1
0.1667
p.L52P
ACH-002177
Lung Cancer
CCLE
APSST
DEG_SPOP_SBC_1
0.1667
p.L52P
NCI-H835
lung
COSMIC
APSST
DEG_SPOP_SBC_1
0.1667
p.R37H
SIDM00534
Colorectal Carcinoma
GDSC
APSST
DEG_SPOP_SBC_1
0.1944
p.R37H
ACH-000986
Colon/Colorectal Cancer
CCLE
APSST
DEG_SPOP_SBC_1
0.1944
p.R37H
HT-115
large_intestine
COSMIC
APSST
DEG_SPOP_SBC_1
0.1944
Drug responses associated with CLEC1A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00468
Agrin [Cleaved into: Agrin N-terminal 110 kDa subunit; Agrin C-terminal 110 kDa subunit; Agrin C-terminal 90 kDa fragment
DEG_SPOP_SBC_1
1007:1011
APSST
SPOP
0.8779
More...
O14745
Na
DEG_SPOP_SBC_1
310:314
APSST
SPOP
0.9989
More...
O95071
E3 ubiquitin-protein ligase UBR5
DEG_SPOP_SBC_1
1730:1734
APSST
SPOP
0.9784
More...
O95677
Eyes absent homolog 4
DEG_SPOP_SBC_1
246:250
APSST
SPOP
0.7114
More...
P35637
RNA-binding protein FUS
DEG_SPOP_SBC_1
105:109
APSST
SPOP
0.9597
More...
P46379
Large proline-rich protein BAG6
DEG_SPOP_SBC_1
414:418
APSST
SPOP
0.8466
More...
P48378
DNA-binding protein RFX2
DEG_SPOP_SBC_1
101:105
APSST
SPOP
0.9989
More...
P51617
Interleukin-1 receptor-associated kinase 1
DEG_SPOP_SBC_1
175:179
APSST
SPOP
0.9726
More...
P80723
Brain acid soluble protein 1
DEG_SPOP_SBC_1
192:196
APSST
SPOP
0.9979
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1508:1512
APSST
SPOP
0.9994
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1881:1885
APSST
SPOP
0.9979
More...
Q03164
Histone-lysine N-methyltransferase 2A
DEG_SPOP_SBC_1
3235:3239
APSST
SPOP
0.9704
More...
Q14244
Ensconsin
DEG_SPOP_SBC_1
456:460
APSST
SPOP
0.9245
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
1031:1035
APSST
SPOP
0.9833
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1633:1637
APSST
SPOP
0.9841
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1656:1660
APSST
SPOP
0.8455
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
2880:2884
APSST
SPOP
0.9592
More...
Q8N183
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2
DEG_SPOP_SBC_1
146:150
APSST
SPOP
0.9957
More...
Q8NC01
C-type lectin domain family 1 member A
DEG_SPOP_SBC_1
42:46
APSST
SPOP
0.6529
More...
Q8NCD3
Holliday junction recognition protein
DEG_SPOP_SBC_1
658:662
APSST
SPOP
0.994
More...
Q96AY4
Tetratricopeptide repeat protein 28
DEG_SPOP_SBC_1
2199:2203
APSST
SPOP
0.9683
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
82:86
APSST
SPOP
0.9637
More...
Q96JG9
Zinc finger protein 469
DEG_SPOP_SBC_1
2382:2386
APSST
SPOP
0.9772
More...
Q9NR99
Matrix-remodeling-associated protein 5
DEG_SPOP_SBC_1
1137:1141
APSST
SPOP
0.855
More...
Q9P2K3
REST corepressor 3
DEG_SPOP_SBC_1
397:401
APSST
SPOP
0.8981
More...
O14513
Nck-associated protein 5
DEG_SPOP_SBC_1
950:954
APSST
SPOP
0.9976
More...
O75956
Cyclin-dependent kinase 2-associated protein 2
DEG_SPOP_SBC_1
9:13
APSST
SPOP
0.9992
More...
Q9UBL0
cAMP-regulated phosphoprotein 21
DEG_SPOP_SBC_1
458:462
APSST
SPOP
0.708
More...
Q9HCE3
Zinc finger protein 532
DEG_SPOP_SBC_1
730:734
APSST
SPOP
0.9471
More...
A6NHS7
MANSC domain-containing protein 4
DEG_SPOP_SBC_1
173:177
APSST
SPOP
0.9451
More...
Q8N1P7
Beta/gamma crystallin domain-containing protein 2
DEG_SPOP_SBC_1
334:338
APSST
SPOP
0.9671
More...