DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APTSS
Uniprot ID:
O43432
Source protein:
Eukaryotic translation initiation factor 4 gamma 3
Source gene:
EIF4G3
Class:
DEG_SPOP_SBC_1
Location:
281:285
E3 ligase:
SPOP
DEGRON score:
0.9619
ASA_SCORE:
83.86
COIL:
0.9328
CONS_SCORE:
0.2153
DSS_SCORE:
0.3963
HELIX:
0.0372
FCONS_SCORE:
0.9258
RIG_SCORE:
0.6803
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V280A
TCGA-AG-A002
READ
TCGA
APTSS
DEG_SPOP_SBC_1
0.3056
p.P274R
TCGA-AP-A0LF
UCEC
TCGA
APTSS
DEG_SPOP_SBC_1
0.1389
p.P274R
DO43610
UCEC
ICGC
APTSS
DEG_SPOP_SBC_1
0.1389
p.S279F
TCGA-IB-7651
PAAD
TCGA
APTSS
DEG_SPOP_SBC_1
0.2778
p.S279F
DO46657
PAAD
ICGC
APTSS
DEG_SPOP_SBC_1
0.2778
p.D277E
DO229018
LICA
ICGC
APTSS
DEG_SPOP_SBC_1
0.2222
p.S295R
DO229026
LICA
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.P271T
DO229026
LICA
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.F272L
DO222847
MELA
ICGC
APTSS
DEG_SPOP_SBC_1
0.0833
p.F272L
DO48547
STAD
ICGC
APTSS
DEG_SPOP_SBC_1
0.0833
p.P288L
DO227740
PBCA
ICGC
APTSS
DEG_SPOP_SBC_1
0.25
p.V284M
DO48946
PBCA
ICGC
APTSS
DEG_SPOP_SBC_1
0.7208
p.L281I
DO42033
UCEC
ICGC
APTSS
DEG_SPOP_SBC_1
0.7174
p.A286T
DO41235
UCEC
ICGC
APTSS
DEG_SPOP_SBC_1
0.3056
p.I278V
SIDM00845
Burkitt's Lymphoma
GDSC
APTSS
DEG_SPOP_SBC_1
0.25
p.R275Q
SIDM00217
Colorectal Carcinoma
GDSC
APTSS
DEG_SPOP_SBC_1
0.1667
p.R275Q
SNU-1040
large_intestine
COSMIC
APTSS
DEG_SPOP_SBC_1
0.1667
p.E289Q
NCI-H1838
lung
COSMIC
APTSS
DEG_SPOP_SBC_1
0.2222
p.R287Q
SNU-1040
large_intestine
COSMIC
APTSS
DEG_SPOP_SBC_1
0.2778
p.A286V
PL18
pancreas
COSMIC
APTSS
DEG_SPOP_SBC_1
0.3056
p.R282Q
SNU-1040
large_intestine
COSMIC
APTSS
DEG_SPOP_SBC_1
0.7329
p.E292D
TK
haematopoietic_and_lymphoid_tissue
COSMIC
APTSS
DEG_SPOP_SBC_1
0.1389
p.P291S
TE-441-T
soft_tissue
COSMIC
APTSS
DEG_SPOP_SBC_1
0.1667
p.R276Q
SNU-1040
large_intestine
COSMIC
APTSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with EIF4G3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43432
Eukaryotic translation initiation factor 4 gamma 3
DEG_SPOP_SBC_1
281:285
APTSS
SPOP
0.9619
More...
O60393
Homeobox protein NOBOX
DEG_SPOP_SBC_1
215:219
APTSS
SPOP
0.9981
More...
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
162:166
APTSS
SPOP
0.9993
More...
P10275
Androgen receptor
DEG_SPOP_SBC_1
217:221
APTSS
SPOP
0.9984
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
228:232
APTSS
SPOP
0.9572
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2335:2339
APTSS
SPOP
0.9594
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2423:2427
APTSS
SPOP
0.7877
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2919:2923
APTSS
SPOP
0.9435
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3409:3413
APTSS
SPOP
0.9913
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3417:3421
APTSS
SPOP
0.9924
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3457:3461
APTSS
SPOP
0.6097
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3723:3727
APTSS
SPOP
0.7478
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3858:3862
APTSS
SPOP
0.9833
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4284:4288
APTSS
SPOP
0.9949
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
934:938
APTSS
SPOP
0.9885
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1528:1532
APTSS
SPOP
0.9822
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
723:727
APTSS
SPOP
0.7462
More...
Q96F45
Zinc finger protein 503
DEG_SPOP_SBC_1
325:329
APTSS
SPOP
0.9804
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1101:1105
APTSS
SPOP
0.9863
More...
Q99966
Cbp/p300-interacting transactivator 1
DEG_SPOP_SBC_1
60:64
APTSS
SPOP
0.9991
More...
Q9BRQ6
MICOS complex subunit MIC25
DEG_SPOP_SBC_1
47:51
APTSS
SPOP
0.8935
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
44:48
APTSS
SPOP
0.7194
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
513:517
APTSS
SPOP
0.9702
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
259:263
APTSS
SPOP
0.9932
More...
Q9UNN5
FAS-associated factor 1
DEG_SPOP_SBC_1
75:79
APTSS
SPOP
0.9907
More...
Q9Y5B0
RNA polymerase II subunit A C-terminal domain phosphatase
DEG_SPOP_SBC_1
412:416
APTSS
SPOP
0.9247
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
2041:2045
APTSS
SPOP
0.9949
More...
O60268
Uncharacterized protein KIAA0513
DEG_SPOP_SBC_1
18:22
APTSS
SPOP
0.9546
More...