DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
APTSS
Uniprot ID:
Q9Y6J0
Source protein:
Calcineurin-binding protein cabin-1
Source gene:
CABIN1
Class:
DEG_SPOP_SBC_1
Location:
2041:2045
E3 ligase:
SPOP
DEGRON score:
0.9949
ASA_SCORE:
85.54
COIL:
0.971
CONS_SCORE:
0.2607
DSS_SCORE:
0.6247
HELIX:
0.0108
FCONS_SCORE:
0.8995
RIG_SCORE:
0.5634
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P2046L
TCGA-BR-8382
STAD
TCGA
APTSS
DEG_SPOP_SBC_1
0.3056
p.P2046L
DO47925
STAD
ICGC
APTSS
DEG_SPOP_SBC_1
0.3056
p.P2036L
TCGA-DF-A2KU
UCEC
TCGA
APTSS
DEG_SPOP_SBC_1
0.1944
p.R2044L
DO229018
LICA
ICGC
APTSS
DEG_SPOP_SBC_1
0.8428
p.K2039T
DO220211
SARC
ICGC
APTSS
DEG_SPOP_SBC_1
0.2778
p.P2042S
SIDM00853
Other Sarcomas
GDSC
APTSS
DEG_SPOP_SBC_1
0.5641
p.P2042S
GCT
soft_tissue
COSMIC
APTSS
DEG_SPOP_SBC_1
0.5641
p.S2043N
ACH-000984
Endometrial/Uterine Cancer
CCLE
APTSS
DEG_SPOP_SBC_1
0.7069
p.P2046Q
TGBC11TKB
stomach
COSMIC
APTSS
DEG_SPOP_SBC_1
0.3056
p.T2047S
RERF-LC-FM
lung
COSMIC
APTSS
DEG_SPOP_SBC_1
0.2778
p.T2047S
RCM-1
large_intestine
COSMIC
APTSS
DEG_SPOP_SBC_1
0.2778
p.P2054L
TT
thyroid
COSMIC
APTSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with CABIN1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43432
Eukaryotic translation initiation factor 4 gamma 3
DEG_SPOP_SBC_1
281:285
APTSS
SPOP
0.9619
More...
O60393
Homeobox protein NOBOX
DEG_SPOP_SBC_1
215:219
APTSS
SPOP
0.9981
More...
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
162:166
APTSS
SPOP
0.9993
More...
P10275
Androgen receptor
DEG_SPOP_SBC_1
217:221
APTSS
SPOP
0.9984
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
228:232
APTSS
SPOP
0.9572
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2335:2339
APTSS
SPOP
0.9594
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2423:2427
APTSS
SPOP
0.7877
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2919:2923
APTSS
SPOP
0.9435
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3409:3413
APTSS
SPOP
0.9913
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3417:3421
APTSS
SPOP
0.9924
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3457:3461
APTSS
SPOP
0.6097
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3723:3727
APTSS
SPOP
0.7478
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3858:3862
APTSS
SPOP
0.9833
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4284:4288
APTSS
SPOP
0.9949
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
934:938
APTSS
SPOP
0.9885
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1528:1532
APTSS
SPOP
0.9822
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
723:727
APTSS
SPOP
0.7462
More...
Q96F45
Zinc finger protein 503
DEG_SPOP_SBC_1
325:329
APTSS
SPOP
0.9804
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1101:1105
APTSS
SPOP
0.9863
More...
Q99966
Cbp/p300-interacting transactivator 1
DEG_SPOP_SBC_1
60:64
APTSS
SPOP
0.9991
More...
Q9BRQ6
MICOS complex subunit MIC25
DEG_SPOP_SBC_1
47:51
APTSS
SPOP
0.8935
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
44:48
APTSS
SPOP
0.7194
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
513:517
APTSS
SPOP
0.9702
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
259:263
APTSS
SPOP
0.9932
More...
Q9UNN5
FAS-associated factor 1
DEG_SPOP_SBC_1
75:79
APTSS
SPOP
0.9907
More...
Q9Y5B0
RNA polymerase II subunit A C-terminal domain phosphatase
DEG_SPOP_SBC_1
412:416
APTSS
SPOP
0.9247
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
2041:2045
APTSS
SPOP
0.9949
More...
O60268
Uncharacterized protein KIAA0513
DEG_SPOP_SBC_1
18:22
APTSS
SPOP
0.9546
More...