DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
APTSS
Uniprot ID:
Q8NDL9
Source protein:
Cytosolic carboxypeptidase-like protein 5
Source gene:
AGBL5
Class:
DEG_SPOP_SBC_1
Location:
723:727
E3 ligase:
SPOP
DEGRON score:
0.7462
ASA_SCORE:
91.46
COIL:
0.9576
CONS_SCORE:
0.3076
DSS_SCORE:
0.7223
HELIX:
0.0162
FCONS_SCORE:
0.986
RIG_SCORE:
0.4829
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R713H
TCGA-BR-4361
STAD
TCGA
APTSS
DEG_SPOP_SBC_1
0.0556
p.R713H
DO38887
STAD
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.R713H
SIDM01099
Neuroblastoma
GDSC
APTSS
DEG_SPOP_SBC_1
0.0556
p.R713H
ACH-000341
Neuroblastoma
CCLE
APTSS
DEG_SPOP_SBC_1
0.0556
p.R713H
SK-N-FI
autonomic_ganglia
COSMIC
APTSS
DEG_SPOP_SBC_1
0.0556
p.A719T
DO222752
COCA
ICGC
APTSS
DEG_SPOP_SBC_1
0.2222
p.A719T
DO233624
GACA
ICGC
APTSS
DEG_SPOP_SBC_1
0.2222
p.P729L
DO222462
ESCA
ICGC
APTSS
DEG_SPOP_SBC_1
0.2778
p.G716E
DO232224
PBCA
ICGC
APTSS
DEG_SPOP_SBC_1
0.1389
p.H713Y
DO40801
UCEC
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.A730T
ACH-001099
Rhabdoid
CCLE
APTSS
DEG_SPOP_SBC_1
0.25
Drug responses associated with AGBL5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43432
Eukaryotic translation initiation factor 4 gamma 3
DEG_SPOP_SBC_1
281:285
APTSS
SPOP
0.9619
More...
O60393
Homeobox protein NOBOX
DEG_SPOP_SBC_1
215:219
APTSS
SPOP
0.9981
More...
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
162:166
APTSS
SPOP
0.9993
More...
P10275
Androgen receptor
DEG_SPOP_SBC_1
217:221
APTSS
SPOP
0.9984
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
228:232
APTSS
SPOP
0.9572
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2335:2339
APTSS
SPOP
0.9594
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2423:2427
APTSS
SPOP
0.7877
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2919:2923
APTSS
SPOP
0.9435
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3409:3413
APTSS
SPOP
0.9913
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3417:3421
APTSS
SPOP
0.9924
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3457:3461
APTSS
SPOP
0.6097
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3723:3727
APTSS
SPOP
0.7478
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3858:3862
APTSS
SPOP
0.9833
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4284:4288
APTSS
SPOP
0.9949
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
934:938
APTSS
SPOP
0.9885
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1528:1532
APTSS
SPOP
0.9822
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
723:727
APTSS
SPOP
0.7462
More...
Q96F45
Zinc finger protein 503
DEG_SPOP_SBC_1
325:329
APTSS
SPOP
0.9804
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1101:1105
APTSS
SPOP
0.9863
More...
Q99966
Cbp/p300-interacting transactivator 1
DEG_SPOP_SBC_1
60:64
APTSS
SPOP
0.9991
More...
Q9BRQ6
MICOS complex subunit MIC25
DEG_SPOP_SBC_1
47:51
APTSS
SPOP
0.8935
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
44:48
APTSS
SPOP
0.7194
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
513:517
APTSS
SPOP
0.9702
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
259:263
APTSS
SPOP
0.9932
More...
Q9UNN5
FAS-associated factor 1
DEG_SPOP_SBC_1
75:79
APTSS
SPOP
0.9907
More...
Q9Y5B0
RNA polymerase II subunit A C-terminal domain phosphatase
DEG_SPOP_SBC_1
412:416
APTSS
SPOP
0.9247
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
2041:2045
APTSS
SPOP
0.9949
More...
O60268
Uncharacterized protein KIAA0513
DEG_SPOP_SBC_1
18:22
APTSS
SPOP
0.9546
More...