DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
APTSS
Uniprot ID:
Q9BRQ6
Source protein:
MICOS complex subunit MIC25
Source gene:
CHCHD6
Class:
DEG_SPOP_SBC_1
Location:
47:51
E3 ligase:
SPOP
DEGRON score:
0.8935
ASA_SCORE:
73.06
COIL:
0.907
CONS_SCORE:
0.4645
DSS_SCORE:
0.7932
HELIX:
0.056
FCONS_SCORE:
0.9176
RIG_SCORE:
0.5769
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R37H
TCGA-2W-A8YY
CESC
TCGA
APTSS
DEG_SPOP_SBC_1
0.0556
p.R37H
DO223732
CESC
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.R37H
SIDM01174
Cervical Carcinoma
GDSC
APTSS
DEG_SPOP_SBC_1
0.0556
p.R37H
ACH-001402
Cervical Cancer
CCLE
APTSS
DEG_SPOP_SBC_1
0.0556
p.R37H
SW756
cervix
COSMIC
APTSS
DEG_SPOP_SBC_1
0.0556
p.T52A
TCGA-60-2704
LUSC
TCGA
APTSS
DEG_SPOP_SBC_1
0.3056
p.T52A
DO26555
LUSC
ICGC
APTSS
DEG_SPOP_SBC_1
0.3056
p.R37L
TCGA-86-A4JF
LUAD
TCGA
APTSS
DEG_SPOP_SBC_1
0.0556
p.R37L
DO45317
LUAD
ICGC
APTSS
DEG_SPOP_SBC_1
0.0556
p.P41L
TCGA-DD-A118
LIHC
TCGA
APTSS
DEG_SPOP_SBC_1
0.1667
p.P41L
DO22905
LIHC
ICGC
APTSS
DEG_SPOP_SBC_1
0.1667
p.S42I
TCGA-DX-A6YT
SARC
TCGA
APTSS
DEG_SPOP_SBC_1
0.6389
p.S42I
DO220007
SARC
ICGC
APTSS
DEG_SPOP_SBC_1
0.6389
p.D57Y
TCGA-E6-A1M0
UCEC
TCGA
APTSS
DEG_SPOP_SBC_1
0.1667
p.D57Y
DO43682
UCEC
ICGC
APTSS
DEG_SPOP_SBC_1
0.1667
p.A47S
DO229019
LICA
ICGC
APTSS
DEG_SPOP_SBC_1
0.7588
p.G58D
SIDM00334
Endometrial Carcinoma
GDSC
APTSS
DEG_SPOP_SBC_1
0.1389
p.G58D
ACH-000879
Endometrial/Uterine Cancer
CCLE
APTSS
DEG_SPOP_SBC_1
0.1389
p.G58D
MFE-296
endometrium
COSMIC
APTSS
DEG_SPOP_SBC_1
0.1389
p.R61K
ACH-000025
Brain Cancer
CCLE
APTSS
DEG_SPOP_SBC_1
0.0556
Drug responses associated with CHCHD6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of APTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43432
Eukaryotic translation initiation factor 4 gamma 3
DEG_SPOP_SBC_1
281:285
APTSS
SPOP
0.9619
More...
O60393
Homeobox protein NOBOX
DEG_SPOP_SBC_1
215:219
APTSS
SPOP
0.9981
More...
O94876
Transmembrane and coiled-coil domains protein 1
DEG_SPOP_SBC_1
162:166
APTSS
SPOP
0.9993
More...
P10275
Androgen receptor
DEG_SPOP_SBC_1
217:221
APTSS
SPOP
0.9984
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
228:232
APTSS
SPOP
0.9572
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2335:2339
APTSS
SPOP
0.9594
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2423:2427
APTSS
SPOP
0.7877
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
2919:2923
APTSS
SPOP
0.9435
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3409:3413
APTSS
SPOP
0.9913
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3417:3421
APTSS
SPOP
0.9924
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3457:3461
APTSS
SPOP
0.6097
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3723:3727
APTSS
SPOP
0.7478
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3858:3862
APTSS
SPOP
0.9833
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
4284:4288
APTSS
SPOP
0.9949
More...
Q14157
Ubiquitin-associated protein 2-like
DEG_SPOP_SBC_1
934:938
APTSS
SPOP
0.9885
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
1528:1532
APTSS
SPOP
0.9822
More...
Q8NDL9
Cytosolic carboxypeptidase-like protein 5
DEG_SPOP_SBC_1
723:727
APTSS
SPOP
0.7462
More...
Q96F45
Zinc finger protein 503
DEG_SPOP_SBC_1
325:329
APTSS
SPOP
0.9804
More...
Q96RK0
Protein capicua homolog
DEG_SPOP_SBC_1
1101:1105
APTSS
SPOP
0.9863
More...
Q99966
Cbp/p300-interacting transactivator 1
DEG_SPOP_SBC_1
60:64
APTSS
SPOP
0.9991
More...
Q9BRQ6
MICOS complex subunit MIC25
DEG_SPOP_SBC_1
47:51
APTSS
SPOP
0.8935
More...
Q9HC84
Mucin-5B
DEG_SPOP_SBC_1
44:48
APTSS
SPOP
0.7194
More...
Q9NRR5
Ubiquilin-4
DEG_SPOP_SBC_1
513:517
APTSS
SPOP
0.9702
More...
Q9P0V3
SH3 domain-binding protein 4
DEG_SPOP_SBC_1
259:263
APTSS
SPOP
0.9932
More...
Q9UNN5
FAS-associated factor 1
DEG_SPOP_SBC_1
75:79
APTSS
SPOP
0.9907
More...
Q9Y5B0
RNA polymerase II subunit A C-terminal domain phosphatase
DEG_SPOP_SBC_1
412:416
APTSS
SPOP
0.9247
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
2041:2045
APTSS
SPOP
0.9949
More...
O60268
Uncharacterized protein KIAA0513
DEG_SPOP_SBC_1
18:22
APTSS
SPOP
0.9546
More...