DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PDSSS
Uniprot ID:
P23760
Source protein:
Paired box protein Pax-3
Source gene:
PAX3
Class:
DEG_SPOP_SBC_1
Location:
348:352
E3 ligase:
SPOP
DEGRON score:
0.9277
ASA_SCORE:
53.44
COIL:
0.8726
CONS_SCORE:
0.4908
DSS_SCORE:
0.5861
HELIX:
0.0944
FCONS_SCORE:
0.9366
RIG_SCORE:
0.6136
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T359P
TCGA-AP-A056
UCEC
TCGA
PDSSS
DEG_SPOP_SBC_1
0.1389
p.T359P
DO43971
UCEC
ICGC
PDSSS
DEG_SPOP_SBC_1
0.1389
p.S358N
TCGA-E6-A1LX
UCEC
TCGA
PDSSS
DEG_SPOP_SBC_1
0.1667
p.S358N
DO41020
UCEC
ICGC
PDSSS
DEG_SPOP_SBC_1
0.1667
p.V339A
DO223394
CLLE
ICGC
PDSSS
DEG_SPOP_SBC_1
0.0833
p.S358R
DO228971
LICA
ICGC
PDSSS
DEG_SPOP_SBC_1
0.1667
p.N347K
DO229027
LICA
ICGC
PDSSS
DEG_SPOP_SBC_1
0.3056
p.T343K
DO229036
LICA
ICGC
PDSSS
DEG_SPOP_SBC_1
0.1944
p.I344F
DO228222
MALY
ICGC
PDSSS
DEG_SPOP_SBC_1
0.2222
p.P348A
SIDM00845
Burkitt's Lymphoma
GDSC
PDSSS
DEG_SPOP_SBC_1
0.6392
p.P347A
ACH-000786
Lymphoma
CCLE
PDSSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PAX3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PDSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00507
Probable ubiquitin carboxyl-terminal hydrolase FAF-Y
DEG_SPOP_SBC_1
977:981
PDSSS
SPOP
0.9861
More...
O14981
TATA-binding protein-associated factor 172
DEG_SPOP_SBC_1
269:273
PDSSS
SPOP
0.935
More...
P02751
Fibronectin
DEG_SPOP_SBC_1
1863:1867
PDSSS
SPOP
0.902
More...
P23760
Paired box protein Pax-3
DEG_SPOP_SBC_1
348:352
PDSSS
SPOP
0.9277
More...
P28702
Retinoic acid receptor RXR-beta
DEG_SPOP_SBC_1
83:87
PDSSS
SPOP
0.9539
More...
P48553
Trafficking protein particle complex subunit 10
DEG_SPOP_SBC_1
1199:1203
PDSSS
SPOP
0.9812
More...
P56645
Period circadian protein homolog 3
DEG_SPOP_SBC_1
748:752
PDSSS
SPOP
0.8579
More...
Q12947
Forkhead box protein F2
DEG_SPOP_SBC_1
310:314
PDSSS
SPOP
0.9763
More...
Q12948
Forkhead box protein C1
DEG_SPOP_SBC_1
260:264
PDSSS
SPOP
0.9877
More...
Q14517
Protocadherin Fat 1
DEG_SPOP_SBC_1
1166:1170
PDSSS
SPOP
0.9878
More...
Q15642
Cdc42-interacting protein 4
DEG_SPOP_SBC_1
498:502
PDSSS
SPOP
0.9962
More...
Q6VAB6
Kinase suppressor of Ras 2
DEG_SPOP_SBC_1
515:519
PDSSS
SPOP
0.9977
More...
Q7LBE3
Solute carrier family 26 member 9
DEG_SPOP_SBC_1
629:633
PDSSS
SPOP
0.9618
More...
Q7Z333
Probable helicase senataxin
DEG_SPOP_SBC_1
1485:1489
PDSSS
SPOP
0.8761
More...
Q86VZ4
Low-density lipoprotein receptor-related protein 11
DEG_SPOP_SBC_1
417:421
PDSSS
SPOP
0.9592
More...
Q8N441
Fibroblast growth factor receptor-like 1
DEG_SPOP_SBC_1
129:133
PDSSS
SPOP
0.8851
More...
Q8TE77
Protein phosphatase Slingshot homolog 3
DEG_SPOP_SBC_1
152:156
PDSSS
SPOP
0.7282
More...
Q92613
Protein Jade-3
DEG_SPOP_SBC_1
567:571
PDSSS
SPOP
0.9916
More...
Q93008
Probable ubiquitin carboxyl-terminal hydrolase FAF-X
DEG_SPOP_SBC_1
976:980
PDSSS
SPOP
0.9934
More...
Q9BRK4
Leucine zipper putative tumor suppressor 2
DEG_SPOP_SBC_1
302:306
PDSSS
SPOP
0.9992
More...
Q9BWT3
Poly
DEG_SPOP_SBC_1
712:716
PDSSS
SPOP
0.9943
More...
Q9H4Z2
Zinc finger protein 335
DEG_SPOP_SBC_1
86:90
PDSSS
SPOP
0.9916
More...
Q9NWZ3
Interleukin-1 receptor-associated kinase 4
DEG_SPOP_SBC_1
148:152
PDSSS
SPOP
0.9855
More...
Q9NXG0
Centlein
DEG_SPOP_SBC_1
1396:1400
PDSSS
SPOP
0.9251
More...
Q9UPT6
C-Jun-amino-terminal kinase-interacting protein 3
DEG_SPOP_SBC_1
945:949
PDSSS
SPOP
0.9951
More...
P31267
Homeobox protein Hox-A6
DEG_SPOP_SBC_1
113:117
PDSSS
SPOP
0.545
More...
Q2T9L4
Inhibitory synaptic factor 1
DEG_SPOP_SBC_1
157:161
PDSSS
SPOP
0.9993
More...
Q5H9T9
Fibrous sheath CABYR-binding protein
DEG_SPOP_SBC_1
170:174
PDSSS
SPOP
0.9796
More...
Q8TA94
Zinc finger protein 563
DEG_SPOP_SBC_1
263:267
PDSSS
SPOP
0.9213
More...
P13985
Putative HTLV-1-related endogenous sequence
DEG_SPOP_SBC_1
139:143
PDSSS
SPOP
0.8586
More...