DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PGSTS
Uniprot ID:
O00444
Source protein:
Serine/threonine-protein kinase PLK4
Source gene:
PLK4
Class:
DEG_SPOP_SBC_1
Location:
807:811
E3 ligase:
SPOP
DEGRON score:
0.9916
ASA_SCORE:
79.14
COIL:
0.9706
CONS_SCORE:
0.4164
DSS_SCORE:
0.5385
HELIX:
0.0112
FCONS_SCORE:
0.9159
RIG_SCORE:
0.5496
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F799S
TCGA-A6-6781
COAD
TCGA
PGSTS
DEG_SPOP_SBC_1
0.1111
p.P807S
TCGA-AX-A2HC
UCEC
TCGA
PGSTS
DEG_SPOP_SBC_1
0.6752
p.F798C
TCGA-D9-A6EC
SKCM
TCGA
PGSTS
DEG_SPOP_SBC_1
0.0833
p.S821F
TCGA-DK-AA71
BLCA
TCGA
PGSTS
DEG_SPOP_SBC_1
0.5
p.G808D
TCGA-FS-A4F8
SKCM
TCGA
PGSTS
DEG_SPOP_SBC_1
0.6087
p.G819V
DO228456
LICA
ICGC
PGSTS
DEG_SPOP_SBC_1
0.1111
p.W820L
DO228948
LICA
ICGC
PGSTS
DEG_SPOP_SBC_1
0.0833
p.W820L
DO218860
SKCA
ICGC
PGSTS
DEG_SPOP_SBC_1
0.0833
p.S798I
DO229041
LICA
ICGC
PGSTS
DEG_SPOP_SBC_1
0.0833
p.A807S
DO229008
LICA
ICGC
PGSTS
DEG_SPOP_SBC_1
0.7588
p.W820C
DO52302
LIHC
ICGC
PGSTS
DEG_SPOP_SBC_1
0.0833
p.W820C
DO218966
PAAD
ICGC
PGSTS
DEG_SPOP_SBC_1
0.0833
p.S812T
DO231734
LINC
ICGC
PGSTS
DEG_SPOP_SBC_1
0.3056
p.S812C
DO25847
LUAD
ICGC
PGSTS
DEG_SPOP_SBC_1
0.3056
p.L799I
DO223286
UCEC
ICGC
PGSTS
DEG_SPOP_SBC_1
0.1111
p.I801V
SIDM00084
Glioblastoma
GDSC
PGSTS
DEG_SPOP_SBC_1
0.1667
p.P819S
SIDM01080
Oral Cavity Carcinoma
GDSC
PGSTS
DEG_SPOP_SBC_1
0.1111
p.P819S
SCC-9
upper_aerodigestive_tract
COSMIC
PGSTS
DEG_SPOP_SBC_1
0.1111
p.S806T
HCT-116
large_intestine
COSMIC
PGSTS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with PLK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PGSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00444
Serine/threonine-protein kinase PLK4
DEG_SPOP_SBC_1
807:811
PGSTS
SPOP
0.9916
More...
O43159
Ribosomal RNA-processing protein 8
DEG_SPOP_SBC_1
172:176
PGSTS
SPOP
0.9713
More...
O76039
Cyclin-dependent kinase-like 5
DEG_SPOP_SBC_1
390:394
PGSTS
SPOP
0.9869
More...
P33076
MHC class II transactivator
DEG_SPOP_SBC_1
284:288
PGSTS
SPOP
0.9991
More...
P45974
Ubiquitin carboxyl-terminal hydrolase 5
DEG_SPOP_SBC_1
713:717
PGSTS
SPOP
0.8563
More...
P53814
Smoothelin
DEG_SPOP_SBC_1
195:199
PGSTS
SPOP
0.5525
More...
P56696
Potassium voltage-gated channel subfamily KQT member 4
DEG_SPOP_SBC_1
421:425
PGSTS
SPOP
0.8114
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
1853:1857
PGSTS
SPOP
0.9915
More...
Q03989
AT-rich interactive domain-containing protein 5A
DEG_SPOP_SBC_1
122:126
PGSTS
SPOP
0.9788
More...
Q12852
Mitogen-activated protein kinase kinase kinase 12
DEG_SPOP_SBC_1
650:654
PGSTS
SPOP
0.9557
More...
Q14721
Potassium voltage-gated channel subfamily B member 1
DEG_SPOP_SBC_1
779:783
PGSTS
SPOP
0.985
More...
Q14865
AT-rich interactive domain-containing protein 5B
DEG_SPOP_SBC_1
385:389
PGSTS
SPOP
0.9096
More...
Q6RFH5
WD repeat-containing protein 74
DEG_SPOP_SBC_1
380:384
PGSTS
SPOP
0.9317
More...
Q8N5S9
Calcium/calmodulin-dependent protein kinase kinase 1
DEG_SPOP_SBC_1
55:59
PGSTS
SPOP
0.9992
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7333:7337
PGSTS
SPOP
0.9942
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
473:477
PGSTS
SPOP
0.986
More...
Q9H1V8
Sodium-dependent neutral amino acid transporter SLC6A17
DEG_SPOP_SBC_1
697:701
PGSTS
SPOP
0.9984
More...
Q9NQW1
Protein transport protein Sec31B
DEG_SPOP_SBC_1
925:929
PGSTS
SPOP
0.9889
More...
Q9NYV4
Cyclin-dependent kinase 12
DEG_SPOP_SBC_1
266:270
PGSTS
SPOP
0.9741
More...
Q9NYZ3
G2 and S phase-expressed protein 1
DEG_SPOP_SBC_1
301:305
PGSTS
SPOP
0.9993
More...
Q9P0L0
Vesicle-associated membrane protein-associated protein A
DEG_SPOP_SBC_1
212:216
PGSTS
SPOP
0.8559
More...
Q9P209
Centrosomal protein of 72 kDa
DEG_SPOP_SBC_1
212:216
PGSTS
SPOP
0.9405
More...
Q9UJY5
ADP-ribosylation factor-binding protein GGA1
DEG_SPOP_SBC_1
313:317
PGSTS
SPOP
0.8423
More...
Q9UPA5
Protein bassoon
DEG_SPOP_SBC_1
73:77
PGSTS
SPOP
0.7536
More...
Q96T92
Insulinoma-associated protein 2
DEG_SPOP_SBC_1
414:418
PGSTS
SPOP
0.9525
More...
O75157
TSC22 domain family protein 2
DEG_SPOP_SBC_1
752:756
PGSTS
SPOP
0.9353
More...