DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PQTSS
Uniprot ID:
O95628
Source protein:
CCR4-NOT transcription complex subunit 4
Source gene:
CNOT4
Class:
DEG_SPOP_SBC_1
Location:
358:362
E3 ligase:
SPOP
DEGRON score:
0.8415
ASA_SCORE:
83.74
COIL:
0.918
CONS_SCORE:
0.322
DSS_SCORE:
0.7415
HELIX:
0.0634
FCONS_SCORE:
1.0106
RIG_SCORE:
0.55
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P365L
TCGA-66-2794
LUSC
TCGA
PQTSS
DEG_SPOP_SBC_1
0.25
p.P365L
DO26683
LUSC
ICGC
PQTSS
DEG_SPOP_SBC_1
0.25
p.S372I
DO227996
COCA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.0556
p.P348L
DO234462
ESAD
ICGC
PQTSS
DEG_SPOP_SBC_1
0.0556
p.S372R
DO229009
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.0556
p.T372K
ACH-000808
Bile Duct Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.0556
p.L370F
ACH-000899
Skin Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with CNOT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
358:362
PQTSS
SPOP
0.8415
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
2173:2177
PQTSS
SPOP
0.9863
More...
P41218
Myeloid cell nuclear differentiation antigen
DEG_SPOP_SBC_1
176:180
PQTSS
SPOP
0.9954
More...
P43694
Transcription factor GATA-4
DEG_SPOP_SBC_1
418:422
PQTSS
SPOP
0.8935
More...
P52564
Dual specificity mitogen-activated protein kinase kinase 6
DEG_SPOP_SBC_1
23:27
PQTSS
SPOP
0.9755
More...
Q09472
Histone acetyltransferase p300
DEG_SPOP_SBC_1
2342:2346
PQTSS
SPOP
0.8022
More...
Q13023
A-kinase anchor protein 6
DEG_SPOP_SBC_1
2232:2236
PQTSS
SPOP
0.9624
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
146:150
PQTSS
SPOP
0.8524
More...
Q14493
Histone RNA hairpin-binding protein
DEG_SPOP_SBC_1
224:228
PQTSS
SPOP
0.5108
More...
Q6K0P9
Pyrin and HIN domain-containing protein 1
DEG_SPOP_SBC_1
179:183
PQTSS
SPOP
0.9899
More...
Q6KC79
Nipped-B-like protein
DEG_SPOP_SBC_1
158:162
PQTSS
SPOP
0.9956
More...
Q6Y7W6
GRB10-interacting GYF protein 2
DEG_SPOP_SBC_1
371:375
PQTSS
SPOP
0.9311
More...
Q8IX01
SURP and G-patch domain-containing protein 2
DEG_SPOP_SBC_1
769:773
PQTSS
SPOP
0.9694
More...
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SPOP_SBC_1
691:695
PQTSS
SPOP
0.9405
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SPOP_SBC_1
500:504
PQTSS
SPOP
0.7617
More...
Q96RT1
Erbin
DEG_SPOP_SBC_1
1214:1218
PQTSS
SPOP
0.8905
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
947:951
PQTSS
SPOP
0.7773
More...
Q9P2G1
Ankyrin repeat and IBR domain-containing protein 1
DEG_SPOP_SBC_1
1076:1080
PQTSS
SPOP
0.9754
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.683
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...