DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PQTSS
Uniprot ID:
Q8IYB3
Source protein:
Serine/arginine repetitive matrix protein 1
Source gene:
SRRM1
Class:
DEG_SPOP_SBC_1
Location:
691:695
E3 ligase:
SPOP
DEGRON score:
0.9405
ASA_SCORE:
110.28
COIL:
0.9686
CONS_SCORE:
0.3417
DSS_SCORE:
0.9246
HELIX:
0.0152
FCONS_SCORE:
0.9326
RIG_SCORE:
0.4307
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V700I
TCGA-36-2547
OV
TCGA
PQTSS
DEG_SPOP_SBC_1
0.1944
p.P697L
TCGA-55-7994
LUAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.2778
p.P697L
ES-2
ovary
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.2778
p.S683L
TCGA-AA-3864
COAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5556
p.S683L
TCGA-W3-AA1R
SKCM
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5556
p.S705L
TCGA-B5-A3FC
UCEC
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5
p.S705L
TCGA-SJ-A6ZI
UCEC
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5
p.Q692E
TCGA-CN-4723
HNSC
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5633
p.R689Q
TCGA-D1-A17Q
UCEC
TCGA
PQTSS
DEG_SPOP_SBC_1
0.2778
p.R689Q
DO41903
UCEC
ICGC
PQTSS
DEG_SPOP_SBC_1
0.2778
p.R689Q
SIDM00243
Other Solid Cancers
GDSC
PQTSS
DEG_SPOP_SBC_1
0.2778
p.R689Q
ACH-002288
Embryonal Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.2778
p.R689Q
NEC8
testis
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.2778
p.P686S
TCGA-F4-6570
COAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.1944
p.R701Q
TCGA-F5-6814
READ
TCGA
PQTSS
DEG_SPOP_SBC_1
0.1667
p.R701Q
DO50732
ORCA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.1667
p.R701Q
DO36556
READ
ICGC
PQTSS
DEG_SPOP_SBC_1
0.1667
p.P695S
DO10443
COAD
ICGC
PQTSS
DEG_SPOP_SBC_1
0.6752
p.S692L
DO8490
COAD
ICGC
PQTSS
DEG_SPOP_SBC_1
0.7667
p.S692L
DO51275
SKCM
ICGC
PQTSS
DEG_SPOP_SBC_1
0.7667
p.Q701E
DO14830
HNSC
ICGC
PQTSS
DEG_SPOP_SBC_1
0.1667
p.R683L
DO228948
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.5556
p.S703F
DO220891
MELA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.1111
p.A682T
DO38202
STAD
ICGC
PQTSS
DEG_SPOP_SBC_1
0.0833
p.R687W
SIDM02041
Colorectal Carcinoma
GDSC
PQTSS
DEG_SPOP_SBC_1
0.2222
p.R687W
SIDM01424
B-Lymphoblastic Leukemia
GDSC
PQTSS
DEG_SPOP_SBC_1
0.2222
p.P688L
SIDM00861
Ovarian Carcinoma
GDSC
PQTSS
DEG_SPOP_SBC_1
0.25
p.P688L
ACH-000906
Ovarian Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.25
p.P688L
ES-2
ovary
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.25
p.R688Q
NEC8
testis
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.25
p.S705P
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.5
p.R698Q
NEC8
testis
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.25
p.P687L
ES-2
ovary
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with SRRM1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
358:362
PQTSS
SPOP
0.8415
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
2173:2177
PQTSS
SPOP
0.9863
More...
P41218
Myeloid cell nuclear differentiation antigen
DEG_SPOP_SBC_1
176:180
PQTSS
SPOP
0.9954
More...
P43694
Transcription factor GATA-4
DEG_SPOP_SBC_1
418:422
PQTSS
SPOP
0.8935
More...
P52564
Dual specificity mitogen-activated protein kinase kinase 6
DEG_SPOP_SBC_1
23:27
PQTSS
SPOP
0.9755
More...
Q09472
Histone acetyltransferase p300
DEG_SPOP_SBC_1
2342:2346
PQTSS
SPOP
0.8022
More...
Q13023
A-kinase anchor protein 6
DEG_SPOP_SBC_1
2232:2236
PQTSS
SPOP
0.9624
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
146:150
PQTSS
SPOP
0.8524
More...
Q14493
Histone RNA hairpin-binding protein
DEG_SPOP_SBC_1
224:228
PQTSS
SPOP
0.5108
More...
Q6K0P9
Pyrin and HIN domain-containing protein 1
DEG_SPOP_SBC_1
179:183
PQTSS
SPOP
0.9899
More...
Q6KC79
Nipped-B-like protein
DEG_SPOP_SBC_1
158:162
PQTSS
SPOP
0.9956
More...
Q6Y7W6
GRB10-interacting GYF protein 2
DEG_SPOP_SBC_1
371:375
PQTSS
SPOP
0.9311
More...
Q8IX01
SURP and G-patch domain-containing protein 2
DEG_SPOP_SBC_1
769:773
PQTSS
SPOP
0.9694
More...
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SPOP_SBC_1
691:695
PQTSS
SPOP
0.9405
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SPOP_SBC_1
500:504
PQTSS
SPOP
0.7617
More...
Q96RT1
Erbin
DEG_SPOP_SBC_1
1214:1218
PQTSS
SPOP
0.8905
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
947:951
PQTSS
SPOP
0.7773
More...
Q9P2G1
Ankyrin repeat and IBR domain-containing protein 1
DEG_SPOP_SBC_1
1076:1080
PQTSS
SPOP
0.9754
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.683
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...