DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PQTSS
Uniprot ID:
Q14493
Source protein:
Histone RNA hairpin-binding protein
Source gene:
SLBP
Class:
DEG_SPOP_SBC_1
Location:
224:228
E3 ligase:
SPOP
DEGRON score:
0.5108
ASA_SCORE:
88.76
COIL:
0.9158
CONS_SCORE:
0.2654
DSS_SCORE:
0.7113
HELIX:
0.0574
FCONS_SCORE:
0.9098
RIG_SCORE:
0.5682
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L215R
TCGA-BR-8589
STAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.0833
p.S229C
DO48418
BLCA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.3056
p.S224Y
DO229028
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.712
p.S228R
DO229038
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.8538
p.D226Y
ACH-000536
Breast Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.7325
p.D226Y
BT-20
breast
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.7325
p.D216Y
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.1111
p.C223W
NUGC-4
stomach
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SLBP mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PQTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
358:362
PQTSS
SPOP
0.8415
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
2173:2177
PQTSS
SPOP
0.9863
More...
P41218
Myeloid cell nuclear differentiation antigen
DEG_SPOP_SBC_1
176:180
PQTSS
SPOP
0.9954
More...
P43694
Transcription factor GATA-4
DEG_SPOP_SBC_1
418:422
PQTSS
SPOP
0.8935
More...
P52564
Dual specificity mitogen-activated protein kinase kinase 6
DEG_SPOP_SBC_1
23:27
PQTSS
SPOP
0.9755
More...
Q09472
Histone acetyltransferase p300
DEG_SPOP_SBC_1
2342:2346
PQTSS
SPOP
0.8022
More...
Q13023
A-kinase anchor protein 6
DEG_SPOP_SBC_1
2232:2236
PQTSS
SPOP
0.9624
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
146:150
PQTSS
SPOP
0.8524
More...
Q14493
Histone RNA hairpin-binding protein
DEG_SPOP_SBC_1
224:228
PQTSS
SPOP
0.5108
More...
Q6K0P9
Pyrin and HIN domain-containing protein 1
DEG_SPOP_SBC_1
179:183
PQTSS
SPOP
0.9899
More...
Q6KC79
Nipped-B-like protein
DEG_SPOP_SBC_1
158:162
PQTSS
SPOP
0.9956
More...
Q6Y7W6
GRB10-interacting GYF protein 2
DEG_SPOP_SBC_1
371:375
PQTSS
SPOP
0.9311
More...
Q8IX01
SURP and G-patch domain-containing protein 2
DEG_SPOP_SBC_1
769:773
PQTSS
SPOP
0.9694
More...
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SPOP_SBC_1
691:695
PQTSS
SPOP
0.9405
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SPOP_SBC_1
500:504
PQTSS
SPOP
0.7617
More...
Q96RT1
Erbin
DEG_SPOP_SBC_1
1214:1218
PQTSS
SPOP
0.8905
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
947:951
PQTSS
SPOP
0.7773
More...
Q9P2G1
Ankyrin repeat and IBR domain-containing protein 1
DEG_SPOP_SBC_1
1076:1080
PQTSS
SPOP
0.9754
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.683
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...