DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PQTSS
Uniprot ID:
Q6KC79
Source protein:
Nipped-B-like protein
Source gene:
NIPBL
Class:
DEG_SPOP_SBC_1
Location:
158:162
E3 ligase:
SPOP
DEGRON score:
0.9956
ASA_SCORE:
92.82
COIL:
0.9538
CONS_SCORE:
0.2733
DSS_SCORE:
0.7425
HELIX:
0.0286
FCONS_SCORE:
1.0873
RIG_SCORE:
0.5766
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S150T
DO224846
LAML
ICGC
PQTSS
DEG_SPOP_SBC_1
0.5556
p.S150I
DO229035
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.5556
p.S148L
TCGA-BH-A0HA
BRCA
TCGA
PQTSS
DEG_SPOP_SBC_1
0.5
p.S148L
DO1658
BRCA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.5
p.S172I
DO233213
GACA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.5
p.P157L
SIDM00445
Esophageal Carcinoma
GDSC
PQTSS
DEG_SPOP_SBC_1
0.3056
p.P157L
ACH-002292
Esophageal Cancer
CCLE
PQTSS
DEG_SPOP_SBC_1
0.3056
p.P157L
OACp4C
oesophagus
COSMIC
PQTSS
DEG_SPOP_SBC_1
0.3056
p.V156A
TCGA-HU-8602
STAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.2778
p.V156A
DO47829
STAD
ICGC
PQTSS
DEG_SPOP_SBC_1
0.2778
p.R165I
DO228978
LICA
ICGC
PQTSS
DEG_SPOP_SBC_1
0.25
p.R154Q
TCGA-WS-AB45
COAD
TCGA
PQTSS
DEG_SPOP_SBC_1
0.2222
p.S153N
TCGA-61-2012
OV
TCGA
PQTSS
DEG_SPOP_SBC_1
0.1944
p.N171S
TCGA-D3-A3BZ
SKCM
TCGA
PQTSS
DEG_SPOP_SBC_1
0.0833
p.N171S
DO47513
SKCM
ICGC
PQTSS
DEG_SPOP_SBC_1
0.0833
p.H149P
TCGA-W5-AA31
CHOL
TCGA
PQTSS
DEG_SPOP_SBC_1
0.0833
Showing 1 to 16 of 16 entries
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Drug responses associated with NIPBL mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of PQTSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13023
A-kinase anchor protein 6
DEG_SPOP_SBC_1
2232:2236
PQTSS
SPOP
0.9624
More...
Q9P2G1
Ankyrin repeat and IBR domain-containing protein 1
DEG_SPOP_SBC_1
1076:1080
PQTSS
SPOP
0.9754
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SPOP_SBC_1
500:504
PQTSS
SPOP
0.7617
More...
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
358:362
PQTSS
SPOP
0.8415
More...
P52564
Dual specificity mitogen-activated protein kinase kinase 6
DEG_SPOP_SBC_1
23:27
PQTSS
SPOP
0.9755
More...
Q14118
Dystroglycan 1
DEG_SPOP_SBC_1
146:150
PQTSS
SPOP
0.8524
More...
Q96RT1
Erbin
DEG_SPOP_SBC_1
1214:1218
PQTSS
SPOP
0.8905
More...
Q6Y7W6
GRB10-interacting GYF protein 2
DEG_SPOP_SBC_1
371:375
PQTSS
SPOP
0.9311
More...
Q09472
Histone acetyltransferase p300
DEG_SPOP_SBC_1
2342:2346
PQTSS
SPOP
0.8022
More...
Q14493
Histone RNA hairpin-binding protein
DEG_SPOP_SBC_1
224:228
PQTSS
SPOP
0.5108
More...
P41218
Myeloid cell nuclear differentiation antigen
DEG_SPOP_SBC_1
176:180
PQTSS
SPOP
0.9954
More...
Q6KC79
Nipped-B-like protein
DEG_SPOP_SBC_1
158:162
PQTSS
SPOP
0.9956
More...
P12270
Nucleoprotein TPR
DEG_SPOP_SBC_1
2173:2177
PQTSS
SPOP
0.9863
More...
Q6K0P9
Pyrin and HIN domain-containing protein 1
DEG_SPOP_SBC_1
179:183
PQTSS
SPOP
0.9899
More...
Q9UFD9
RIMS-binding protein 3A
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...
A6NNM3
RIMS-binding protein 3B
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.6974
More...
A6NJZ7
RIMS-binding protein 3C
DEG_SPOP_SBC_1
230:234
PQTSS
SPOP
0.683
More...
Q8IYB3
Serine/arginine repetitive matrix protein 1
DEG_SPOP_SBC_1
691:695
PQTSS
SPOP
0.9405
More...
Q8IX01
SURP and G-patch domain-containing protein 2
DEG_SPOP_SBC_1
769:773
PQTSS
SPOP
0.9694
More...
P43694
Transcription factor GATA-4
DEG_SPOP_SBC_1
418:422
PQTSS
SPOP
0.8935
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
947:951
PQTSS
SPOP
0.7773
More...
Showing 1 to 21 of 21 entries
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