Search results: The pahtway p1960 has 100 genes in the original annotation. Currently, there are 64 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
51703ACSL5ACS2 | ACS5 | FACL5acyl-CoA synthetase long-chain family member 510q25.2CV:PGCnp
DNM:Fromer_2014
CompositeSet
1892ECHS1ECHS1D | SCEHenoyl-CoA hydratase, short chain, 1, mitochondrial10q26.2-q26.3CV:PGCnp
GSMA_IIA
Network
3611ILKHEL-S-28 | ILK-1 | ILK-2 | P59 | p59ILKintegrin linked kinase11p15.4CV:PGCnp
Network
7140TNNT3TNTFtroponin T3, fast skeletal type11p15.5CV:PGCnp
DMG:Wockner_2014
5837PYGM-phosphorylase, glycogen, muscle11q12-q13.2DMG:Wockner_2014
PMID:cooccur
710SERPING1C1IN | C1INH | C1NH | HAE1 | HAE2serpin peptidase inhibitor, clade G (C1 inhibitor), member 111q12.1CV:PGCnp
Expression
5091PCPCBpyruvate carboxylase11q13.4-q13.5CV:PGCnp
PMID:cooccur
G2Cdb.human_mitochondria
G2Cdb.humanPSD
G2Cdb.humanPSP
10632ATP5LATP5JGATP synthase, H+ transporting, mitochondrial Fo complex subunit G11q23.3Expression
GSMA_I
50515CHST11C4ST | C4ST-1 | C4ST1 | HSA269537carbohydrate (chondroitin 4) sulfotransferase 1112qCV:GWASdb
CV:PGCnp
DMG:Wockner_2014
2735GLI1GLIGLI family zinc finger 112q13.3CV:PGCnp
7337UBE3AANCR | AS | E6-AP | EPVE6AP | HPVE6Aubiquitin protein ligase E3A15q11.2CNV:YES
CV:PGCnp
DMG:Nishioka_2013
GO_Annotation
PMID:cooccur
567B2MIMD43beta-2-microglobulin15q21.1CV:PGCnp
PMID:cooccur
51451LCMT1CGI-68 | LCMT | PPMT1leucine carboxyl methyltransferase 116p12.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
GSMA_IIE
5310PKD1PBP | Pc-1 | TRPP1polycystin 1, transient receptor potential channel interacting16p13.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
11060WWP2AIP2 | WWp2-likeWW domain containing E3 ubiquitin protein ligase 216q22.1CV:PGCnp
DMG:Wockner_2014
3240HPBP | HP2ALPHA2 | HPA1Shaptoglobin16q22.2Association
Core
CV:PGCnp
DMG:vanEijk_2014
GO_Annotation
GR_Ng
GR_WM
Network
PMID:cooccur
4239MFAP4-microfibrillar associated protein 417p11.2CV:PGCnp
GO_Annotation
5598MAPK7BMK1 | ERK4 | ERK5 | PRKM7mitogen-activated protein kinase 717p11.2CV:PGCnpAscano FMRP targets
8557TCAPCMD1N | CMH25 | LGMD2G | T-cap | TELE | telethonintitin-cap17q12CV:PGCnp
Network
11072DUSP14MKP-L | MKP6dual specificity phosphatase 1417q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
2194FASNFAS | OA-519 | SDR27X1fatty acid synthase17q25CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
CELL METABOLISM
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
2548GAALYAGglucosidase, alpha; acid17q25.2-q25.3PMID:cooccur
4089SMAD4DPC4 | JIP | MADH4 | MYHRSSMAD family member 418q21.1CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
Network
PMID:cooccur
5802PTPRSPTPSIGMAprotein tyrosine phosphatase, receptor type S19p13.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Network
TYROSINE KINASE SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
166AESAES-1 | AES-2 | ESP1 | GRG | GRG5 | Grg-5 | TLE5amino-terminal enhancer of split19p13.3CV:PGCnp
PMID:cooccur
718C3AHUS5 | ARMD9 | ASP | C3a | C3b | CPAMD1 | HEL-S-62pcomplement component 319p13.3-p13.2Association
CV:PGCnp
GO_Annotation
GR_Ng
GR_WM
PMID:cooccur
4059BCAMAU | CD239 | LU | MSK19basal cell adhesion molecule (Lutheran blood group)19q13.2DMG:Wockner_2014
5296PIK3R2MPPH | MPPH1 | P85B | p85 | p85-BETAphosphoinositide-3-kinase regulatory subunit 219q13.2-q13.4CV:PGCnp
DMG:Wockner_2014
Network
6195RPS6KA1HU-1 | MAPKAPK1A | RSK | RSK1 | p90Rskribosomal protein S6 kinase A11pCV:PGCnp
DMG:Montano_2016
DMG:Nishioka_2013
6342SCP2NLTP | NSL-TP | SCP-2 | SCP-CHI | SCP-X | SCPXsterol carrier protein 21p32CV:PGCnp
DMG:Wockner_2014
533ATP6V0BATP6F | HATPL | VMA16ATPase H+ transporting V0 subunit b1p32.3CV:PGCnp
5792PTPRFBNAH2 | LARprotein tyrosine phosphatase, receptor type F1p34CV:GWAScat
CV:PGC128
CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
3925STMN1C1orf215 | LAP18 | Lag | OP18 | PP17 | PP19 | PR22 | SMNstathmin 11p36.11CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
712C1QA-complement component 1, q subcomponent, A chain1p36.12CV:PGCnp
PMID:cooccur
10628TXNIPEST01027 | HHCPA78 | THIF | VDUP1thioredoxin interacting protein1q21.1CNV:YES
CV:PGCnp
Expression
GR_Ng
GSMA_I
GSMA_IIA
947CD34-CD34 molecule1q32CV:GWASdb
CV:PGCnp
PMID:cooccur
5664PSEN2AD3L | AD4 | CMD1V | PS2 | STM2presenilin 21q42.13CV:PGCnp
Network
PMID:cooccur
NEUROTROPHIN SIGNALING
2139EYA2EAB1EYA transcriptional coactivator and phosphatase 220q13.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
1292COL6A2BTHLM1 | PP3610 | UCMD1collagen type VI alpha 221q22.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
4151MBPVALB | myoglobginmyoglobin22q13.1CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
6711SPTBN1ELF | HEL102 | SPTB2 | betaSpIIspectrin beta, non-erythrocytic 12p21CV:GWASdb
CV:PGCnp
Network
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_PocklingtonH1
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
5500PPP1CBHEL-S-80p | PP-1B | PP1B | PP1beta | PPP1CDprotein phosphatase 1 catalytic subunit beta2p23CV:PGCnpINTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Chromatin Remodeling Genes
1281COL3A1EDS4Acollagen type III alpha 12q31CV:PGCnp
DNM:Xu_2012
CompositeSet
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
1674DESCSM1 | CSM2 | LGMD2Rdesmin2q35CV:PGCnp
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
3913LAMB2LAMS | NPHS5laminin subunit beta 23p21CV:PGCnp
GO_Annotation
2049EPHB3ETK2 | HEK2 | TYRO6EPH receptor B33q27.1CV:PGCnp
DNM:Fromer_2014
GO_Annotation
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
51294PCDH12VE-cadherin-2 | VECAD2protocadherin 125q31Expression
GO_Annotation
GSMA_I
PMID:cooccur
9547CXCL14BMAC | BRAK | KEC | KS1 | MIP-2g | MIP2G | NJAC | SCYB14C-X-C motif chemokine ligand 145q31CV:PGCnp
DMG:Wockner_2014
GSMA_I
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
667DSTBP240 | BPA | BPAG1 | CATX-15 | CATX15 | D6S1101 | DMH | DT | EBSB2 | HSAN6 | MACF2dystonin6p12.1CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIE
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
2968GTF2H4P52 | TFB2 | TFIIHgeneral transcription factor IIH subunit 46p21.3CV:PGCnp
DMG:Jaffe_2016
GSMA_I
6785ELOVL4ADMD | CT118 | ISQMR | SCA34 | STGD2 | STGD3ELOVL fatty acid elongase 46q14CV:PGCnp
DMG:Wockner_2014
2697GJA1AVSD3 | CMDR | CX43 | EKVP | GJAL | HLHS1 | HSS | ODDD | PPKCAgap junction protein alpha 16q22.31CV:PGCnp
DMG:Wockner_2014
Network
ION BALANCE
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1523CUX1CASP | CDP | CDP/Cut | CDP1 | COY1 | CUTL1 | CUX | Clox | Cux/CDP | GOLIM6 | Nbla10317 | p100 | p110 | p200 | p75cut like homeobox 17q22.1CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
7791ZYXESP-2 | HED-2zyxin7q32CV:PGCnp
DMG:Wockner_2014
Network
2041EPHA1EPH | EPHT | EPHT1EPH receptor A17q34DMG:Wockner_2014
649BMP1OI13 | PCOLC | PCP | PCP2 | TLDbone morphogenetic protein 18p21.3CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
7169TPM2AMCD1 | DA1 | DA2B | HEL-S-273 | NEM4 | TMSBtropomyosin 2 (beta)9p13CV:PGCnp
DMG:vanEijk_2014
Network
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
1384CRATCAT1carnitine O-acetyltransferase9q34.1CV:PGCnp
1947EFNB1CFND | CFNS | EFB1 | EFL3 | EPLG2 | Elk-L | LERK2ephrin-B1Xq12CV:GWAScat
CV:PGC128
CV:PGCnp
GO_Annotation
Network
2182ACSL4ACS4 | FACL4 | LACS4 | MRX63 | MRX68acyl-CoA synthetase long-chain family member 4Xq22.3-q23CV:PGCnp
DNM:Fromer_2014
CompositeSet
Potential synaptic genes
7319UBE2AHHR6A | MRXS30 | MRXSN | RAD6A | UBC2ubiquitin conjugating enzyme E2 AXq24CV:PGCnp
PMID:cooccur