Search results: The pahtway p4401 has 112 genes in the original annotation. Currently, there are 64 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
340665CYP26C1FFDD4cytochrome P450 family 26 subfamily C member 110q23.33CV:PGCnp
GO_Annotation
PMID:cooccur
3983ABLIM1ABLIM | LIMAB1 | LIMATIN | abLIM-1actin binding LIM protein 110q25CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
CompositeSet
Potential synaptic genes
9409PEX16PBD8A | PBD8Bperoxisomal biogenesis factor 1611p11.2CV:PGCnp
120071GYLTL1BLARGE2 | PP5656glycosyltransferase-like 1B11p11.2CV:PGCnp
25996REXO2CGI-114 | REX2 | RFN | SFNRNA exonuclease 211q23.2CV:PGCnp
DMG:Jaffe_2016
GSMA_I
7450VWFF8VWF | VWDvon Willebrand factor12p13.3CV:PGCnp
Expression
PMID:cooccur
3887KRT81HB1 | Hb-1 | KRTHB1 | MLN137 | ghHkb1 | hHAKB2-1keratin 8112q13CV:PGCnp
57658CALCOCO1Cocoa | PP13275 | calphoglincalcium binding and coiled-coil domain 112q13.13CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
64786TBC1D15RAB7-GAPTBC1 domain family member 1512q21.1CV:GWASdb
CV:PGCnp
79758DHRS12SDR40C1dehydrogenase/reductase (SDR family) member 1213q14.3DMG:Wockner_2014
85446ZFHX2ZFH-5 | ZNF409zinc finger homeobox 214q11.2CV:GWASdb
CV:PGCnp
CompositeSet
Darnell FMRP targets
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
6547SLC8A3NCX3solute carrier family 8 member A314q24.1CV:PGCnp
DMG:Nishioka_2013
ION BALANCE
2957GTF2A1TF2A1 | TFIIA | TFIIA-42 | TFIIALgeneral transcription factor IIA 114q31.1CV:GWASdb
CV:PGCnp
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
348093RBPMS2-RNA binding protein with multiple splicing 215q22.31CV:PGCnp
DMG:Jaffe_2016
54852PAQR5MPRGprogestin and adipoQ receptor family member V15q23CV:GWAScat
CV:GWASdb
CV:PGCnp
4502MT2AMT2metallothionein 2A16q13CV:PGCnp
PMID:cooccur
116840CNTROBLIP8 | PP1221centrobin, centrosomal BRCA2 interacting protein17p13.1CV:PGCnp
9196KCNAB3AKR6A9 | KCNA3.1B | KCNA3B | KV-BETA-3potassium voltage-gated channel subfamily A regulatory beta subunit 317p13.1CV:PGCnp
DEG:Zhao_2015
DMG:Jaffe_2016
58485TRAPPC1BET5 | MUM2trafficking protein particle complex 117p13.1CV:PGCnp
201176ARHGAP27CAMGAP1 | PP905 | SH3D20 | SH3P20Rho GTPase activating protein 2717q21.31CV:PGCnp
26115TANC2ROLSA | rolstetratricopeptide repeat, ankyrin repeat and coiled-coil containing 217q23.3CV:PGCnp
DMG:Jaffe_2016
DNM:Fromer_2014
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
29115SAP30BPHCNGP | HTRG | HTRPSAP30 binding protein17q25.1CV:PGCnp
DNM:Xu_2012
CompositeSet
124583CANT1DBQD | DBQD1 | SCAN-1 | SCAN1 | SHAPYcalcium activated nucleotidase 117q25.3CV:PGCnp
9063PIAS2ARIP3 | DIP | MIZ | MIZ1 | PIASX | PIASX-ALPHA | PIASX-BETA | SIZ2 | ZMIZ4protein inhibitor of activated STAT 218q21.1CV:PGCnp
PMID:cooccur
5366PMAIP1APR | NOXAphorbol-12-myristate-13-acetate-induced protein 118q21.32CV:PGCnp
DMG:Jaffe_2016
56848SPHK2SK 2 | SK-2 | SPK 2 | SPK-2sphingosine kinase 219q13.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
140612ZFP28mkr5ZFP28 zinc finger protein19q13.43CV:PGCnp
DMG:Wockner_2014
63934ZNF667MIPU1zinc finger protein 66719q13.43CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
147948ZNF582-zinc finger protein 58219q13.43CV:PGCnp
51686OAZ3AZ3 | OAZ-t | TISP15ornithine decarboxylase antizyme 31q21.3DMG:Wockner_2014
GSMA_I
GSMA_IIA
26052DNM3Dyna IIIdynamin 31q24.3CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
ENDOCYTOSIS
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes
10765KDM5BCT31 | JARID1B | PLU-1 | PLU1 | PPP1R98 | PUT1 | RBBP2H1A | RBP2-H1lysine demethylase 5B1q32.1CV:GWASdb
PMID:cooccur
Ascano FMRP targets
Chromatin Remodeling Genes
3172HNF4AFRTS4 | HNF4 | HNF4a7 | HNF4a8 | HNF4a9 | HNF4alpha | MODY | MODY1 | NR2A1 | NR2A21 | TCF | TCF14hepatocyte nuclear factor 4 alpha20q13.12CV:PGCnp
GO_Annotation
PMID:cooccur
8675STX16SYN16syntaxin 1620q13.32CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
3455IFNAR2IFN-R | IFN-alpha-REC | IFNABR | IFNARB | IMD45interferon alpha and beta receptor subunit 221q22.11CV:PGCnp
DNM:Fromer_2014
Network
CompositeSet
3973LHCGRHHG | LCGR | LGR2 | LH/CG-R | LH/CGR | LHR | LHRHR | LSH-R | ULG5luteinizing hormone/choriogonadotropin receptor2p21CV:PGCnp
3685ITGAVCD51 | MSK8 | VNRA | VTNRintegrin subunit alpha V2q31-q32CV:PGCnp
DMG:Wockner_2014
8828NRP2NP2 | NPN2 | PRO2714 | VEGF165R2neuropilin 22q33.3CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
5217PFN2D3S1319E | PFLprofilin 23q25.1NetworkSTRUCTURAL PLASTICITY
CompositeSet
131408FAM131AC3orf40 | FLAT715 | PRO1378family with sequence similarity 131 member A3q27.1DMG:Wockner_2014
80235PIGZGPI-MT-IV | PIG-Z | SMP3phosphatidylinositol glycan anchor biosynthesis class Z3q29CNV:YES
CV:PGCnp
DMG:Wockner_2014
2983GUCY1B3GC-S-beta-1 | GC-SB3 | GUC1B3 | GUCB3 | GUCSB3 | GUCY1B1guanylate cyclase 1, soluble, beta 34q31.3-q33CV:PGCnp
DMG:Wockner_2014
Expression
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.humanPSD
G2Cdb.humanPSP
7097TLR2CD282 | TIL4toll like receptor 24q32CV:PGCnp
PMID:cooccur
54622ARL15ARFRP2ADP ribosylation factor like GTPase 155p15.2CV:GWASdb
CV:PGCnp
1393CRHBPCRF-BP | CRFBPcorticotropin releasing hormone binding protein5q13.3CV:PGCnp
PMID:cooccur
NEUROTROPHIN SIGNALING
4762NEUROG1AKA | Math4C | NEUROD3 | bHLHa6 | ngn1neurogenin 15q23-q31Association
CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GR_WM
GSMA_I
PMID:cooccur
222584FAM83BC6orf143family with sequence similarity 83 member B6p12.1CV:PGCnp
GSMA_IIE
4795NFKBIL1IKBL | LST1 | NFKBILNFKB inhibitor like 16p21.3CV:PGCnp
DMG:Nishioka_2013
GSMA_I
PMID:cooccur
534ATP6V1G2ATP6G | ATP6G2 | NG38 | VMA10ATPase H+ transporting V1 subunit G26p21.3GO_Annotation
GSMA_I
ION BALANCE
CompositeSet
9374PPT2C6orf8 | G14 | PPT-2palmitoyl-protein thioesterase 26p21.3CV:PGCnp
DMG:Jaffe_2016
DMG:Montano_2016
GSMA_I
5460POU5F1OCT3 | OCT4 | OTF-3 | OTF3 | OTF4 | Oct-3 | Oct-4POU class 5 homeobox 16p21.31CV:PGCnp
GSMA_I
80863PRRT1C6orf31 | DSPD1 | IFITMD7 | NG5proline rich transmembrane protein 16p21.32CV:PGCnp
DMG:Montano_2016
GSMA_I
G2Cdb.humanPSD
G2Cdb.humanPSP
51142CHCHD2C7orf17 | MNRR1 | NS2TP | PARK22coiled-coil-helix-coiled-coil-helix domain containing 27p11.2CV:PGCnp
23534TNPO3IPO12 | LGMD1F | MTR10A | TRN-SR | TRN-SR2 | TRNSRtransportin 37q32.1CV:PGCnpAscano FMRP targets
835CASP2CASP-2 | ICH1 | NEDD-2 | NEDD2 | PPP1R57caspase 27q34-q35CV:PGCnp
55893ZNF395HDBP-2 | HDBP2 | HDRF-2 | PBF | PRF-1 | PRF1 | Si-1-8-14zinc finger protein 3958p21.1CV:PGCnp
DEG:Maycox_2009
DMG:Wockner_2014
Expression
GSMA_IIA
GSMA_IIE
Ascano FMRP targets
92421CHMP4CSNF7-3 | Shax3 | VPS32Ccharged multivesicular body protein 4C8q21.13CV:GWASdb
CV:PGCnp
9420CYP7B1CBAS3 | CP7B | SPG5Acytochrome P450 family 7 subfamily B member 18q21.3CV:GWASdb
CV:PGCnp
55529TMEM55A-transmembrane protein 55A8q21.3CV:PGCnp
DMG:Wockner_2014
51010EXOSC3CGI-102 | PCH1B | RRP40 | Rrp40p | bA3J10.7 | hRrp-40 | p10exosome component 39p11CV:PGCnp
PMID:cooccur
30968STOML2HSPC108 | SLP-2stomatin like 29p13.1CV:PGCnp
GO_Annotation
G2Cdb.humanPSD
G2Cdb.humanPSP
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur