DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PPTSS
Uniprot ID:
Q9H2S1
Source protein:
Small conductance calcium-activated potassium channel protein 2
Source gene:
KCNN2
Class:
DEG_SPOP_SBC_1
Location:
572:576
E3 ligase:
SPOP
DEGRON score:
0.9415
ASA_SCORE:
91.62
COIL:
0.9768
CONS_SCORE:
0.2959
DSS_SCORE:
0.8836
HELIX:
0.0122
FCONS_SCORE:
1.0013
RIG_SCORE:
0.507
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R563W
TCGA-17-Z045
LUAD
TCGA
PPTSS
DEG_SPOP_SBC_1
0.0833
p.S562C
TCGA-77-8133
LUSC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.5
p.S562C
DO27039
LUSC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.5
p.R566W
TCGA-A5-A1OF
UCEC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.1667
p.R566W
TCGA-AX-A06F
UCEC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.1667
p.R566W
DO41752
UCEC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1667
p.R566W
DO42568
UCEC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1667
p.S562Y
TCGA-A8-A0A7
BRCA
TCGA
PPTSS
DEG_SPOP_SBC_1
0.5
p.S562Y
DO5936
BRCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.5
p.R565W
TCGA-AX-A05W
UCEC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.1389
p.R565W
DO50315
ESAD
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1389
p.R565W
DO40966
UCEC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1389
p.S575L
TCGA-BH-A18J
BRCA
TCGA
PPTSS
DEG_SPOP_SBC_1
0.7667
p.S575L
DO4527
BRCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.7667
p.S575A
TCGA-UF-A71E
HNSC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.7588
p.S575A
DO52110
HNSC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.7588
p.S578N
DO234326
ESAD
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2778
p.S578N
DO46396
OV
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2778
p.P572L
DO227579
ORCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.7582
p.S562F
SIDM00882
Breast Carcinoma
GDSC
PPTSS
DEG_SPOP_SBC_1
0.5
p.S562F
ACH-000277
Breast Cancer
CCLE
PPTSS
DEG_SPOP_SBC_1
0.5
p.S562F
HCC1419
breast
COSMIC
PPTSS
DEG_SPOP_SBC_1
0.5
p.S565F
HCC1419
breast
COSMIC
PPTSS
DEG_SPOP_SBC_1
0.1389
p.R562Q
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PPTSS
DEG_SPOP_SBC_1
0.5
p.S564L
NCI-H1993
lung
COSMIC
PPTSS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with KCNN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14773
Tripeptidyl-peptidase 1
DEG_SPOP_SBC_1
177:181
PPTSS
SPOP
0.9584
More...
O15178
T-box transcription factor T
DEG_SPOP_SBC_1
340:344
PPTSS
SPOP
0.6236
More...
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
819:823
PPTSS
SPOP
0.9708
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
176:180
PPTSS
SPOP
0.6895
More...
P52333
Tyrosine-protein kinase JAK3
DEG_SPOP_SBC_1
494:498
PPTSS
SPOP
0.8529
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3890:3894
PPTSS
SPOP
0.5277
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
368:372
PPTSS
SPOP
0.8864
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1119:1123
PPTSS
SPOP
0.925
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1496:1500
PPTSS
SPOP
0.9496
More...
Q15311
RalA-binding protein 1
DEG_SPOP_SBC_1
7:11
PPTSS
SPOP
0.9992
More...
Q7Z2Z1
Treslin
DEG_SPOP_SBC_1
1228:1232
PPTSS
SPOP
0.9477
More...
Q7Z6G8
Ankyrin repeat and sterile alpha motif domain-containing protein 1B
DEG_SPOP_SBC_1
567:571
PPTSS
SPOP
0.9694
More...
Q8TCX5
Rhophilin-1
DEG_SPOP_SBC_1
384:388
PPTSS
SPOP
0.7809
More...
Q93074
Mediator of RNA polymerase II transcription subunit 12
DEG_SPOP_SBC_1
336:340
PPTSS
SPOP
0.7185
More...
Q9H1J1
Regulator of nonsense transcripts 3A
DEG_SPOP_SBC_1
45:49
PPTSS
SPOP
0.9468
More...
Q9H2S1
Small conductance calcium-activated potassium channel protein 2
DEG_SPOP_SBC_1
572:576
PPTSS
SPOP
0.9415
More...
Q9HBB8
Cadherin-related family member 5
DEG_SPOP_SBC_1
512:516
PPTSS
SPOP
0.8871
More...
Q9HCI5
Melanoma-associated antigen E1
DEG_SPOP_SBC_1
141:145
PPTSS
SPOP
0.9976
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
1600:1604
PPTSS
SPOP
0.9908
More...
Q9NT68
Teneurin-2
DEG_SPOP_SBC_1
172:176
PPTSS
SPOP
0.9859
More...
Q6P499
NIPA-like protein 3
DEG_SPOP_SBC_1
15:19
PPTSS
SPOP
0.8666
More...
Q8N801
Protein STPG4
DEG_SPOP_SBC_1
187:191
PPTSS
SPOP
0.5486
More...
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_SPOP_SBC_1
705:709
PPTSS
SPOP
0.8542
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
727:731
PPTSS
SPOP
0.971
More...
Q9Y4E6
WD repeat-containing protein 7
DEG_SPOP_SBC_1
936:940
PPTSS
SPOP
0.9515
More...