DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPTSS
Uniprot ID:
Q9HBB8
Source protein:
Cadherin-related family member 5
Source gene:
CDHR5
Class:
DEG_SPOP_SBC_1
Location:
512:516
E3 ligase:
SPOP
DEGRON score:
0.8871
ASA_SCORE:
75.44
COIL:
0.897
CONS_SCORE:
0.5224
DSS_SCORE:
0.9106
HELIX:
0.0168
FCONS_SCORE:
0.8584
RIG_SCORE:
0.5195
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G519W
TCGA-21-1070
LUSC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.25
p.G519W
DO27088
LUSC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.25
p.S506F
TCGA-EK-A3GK
CESC
TCGA
PPTSS
DEG_SPOP_SBC_1
0.1667
p.S506F
DO49964
CESC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1667
p.D520N
DO222427
BTCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.H503Y
DO222648
BTCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.0833
p.C508S
DO229010
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.C508S
DO229013
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.C508S
DO229016
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.C508S
DO229003
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.C508S
DO229005
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.P521S
DO229010
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.P521S
DO229013
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.P521S
DO229016
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.P521S
DO229003
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.P521S
DO229005
COCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.P521S
DO229353
LAML
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.C508F
DO233843
GACA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.G520R
DO50822
LIRI
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.P512T
DO230530
LUSC
ICGC
PPTSS
DEG_SPOP_SBC_1
0.7031
p.G520E
DO220906
MELA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.2222
p.Q522H
DO229167
THCA
ICGC
PPTSS
DEG_SPOP_SBC_1
0.1667
p.S515L
SIDM01293
Colorectal Carcinoma
GDSC
PPTSS
DEG_SPOP_SBC_1
0.7667
p.S515W
SIDM00612
Glioma
GDSC
PPTSS
DEG_SPOP_SBC_1
0.7874
p.S515W
KINGS-1
central_nervous_system
COSMIC
PPTSS
DEG_SPOP_SBC_1
0.7874
p.P513S
SIDM00068
Colorectal Carcinoma
GDSC
PPTSS
DEG_SPOP_SBC_1
0.5641
p.G507S
SIDM01617
Endometrial Carcinoma
GDSC
PPTSS
DEG_SPOP_SBC_1
0.1944
p.G507S
ACH-000994
Endometrial/Uterine Cancer
CCLE
PPTSS
DEG_SPOP_SBC_1
0.1944
Drug responses associated with CDHR5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14773
Tripeptidyl-peptidase 1
DEG_SPOP_SBC_1
177:181
PPTSS
SPOP
0.9584
More...
O15178
T-box transcription factor T
DEG_SPOP_SBC_1
340:344
PPTSS
SPOP
0.6236
More...
O60641
Clathrin coat assembly protein AP180
DEG_SPOP_SBC_1
819:823
PPTSS
SPOP
0.9708
More...
P49750
YLP motif-containing protein 1
DEG_SPOP_SBC_1
176:180
PPTSS
SPOP
0.6895
More...
P52333
Tyrosine-protein kinase JAK3
DEG_SPOP_SBC_1
494:498
PPTSS
SPOP
0.8529
More...
P98088
Mucin-5AC
DEG_SPOP_SBC_1
3890:3894
PPTSS
SPOP
0.5277
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
368:372
PPTSS
SPOP
0.8864
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1119:1123
PPTSS
SPOP
0.925
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1496:1500
PPTSS
SPOP
0.9496
More...
Q15311
RalA-binding protein 1
DEG_SPOP_SBC_1
7:11
PPTSS
SPOP
0.9992
More...
Q7Z2Z1
Treslin
DEG_SPOP_SBC_1
1228:1232
PPTSS
SPOP
0.9477
More...
Q7Z6G8
Ankyrin repeat and sterile alpha motif domain-containing protein 1B
DEG_SPOP_SBC_1
567:571
PPTSS
SPOP
0.9694
More...
Q8TCX5
Rhophilin-1
DEG_SPOP_SBC_1
384:388
PPTSS
SPOP
0.7809
More...
Q93074
Mediator of RNA polymerase II transcription subunit 12
DEG_SPOP_SBC_1
336:340
PPTSS
SPOP
0.7185
More...
Q9H1J1
Regulator of nonsense transcripts 3A
DEG_SPOP_SBC_1
45:49
PPTSS
SPOP
0.9468
More...
Q9H2S1
Small conductance calcium-activated potassium channel protein 2
DEG_SPOP_SBC_1
572:576
PPTSS
SPOP
0.9415
More...
Q9HBB8
Cadherin-related family member 5
DEG_SPOP_SBC_1
512:516
PPTSS
SPOP
0.8871
More...
Q9HCI5
Melanoma-associated antigen E1
DEG_SPOP_SBC_1
141:145
PPTSS
SPOP
0.9976
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
1600:1604
PPTSS
SPOP
0.9908
More...
Q9NT68
Teneurin-2
DEG_SPOP_SBC_1
172:176
PPTSS
SPOP
0.9859
More...
Q6P499
NIPA-like protein 3
DEG_SPOP_SBC_1
15:19
PPTSS
SPOP
0.8666
More...
Q8N801
Protein STPG4
DEG_SPOP_SBC_1
187:191
PPTSS
SPOP
0.5486
More...
Q96DN6
Methyl-CpG-binding domain protein 6
DEG_SPOP_SBC_1
705:709
PPTSS
SPOP
0.8542
More...
Q6ZU65
Ubinuclein-2
DEG_SPOP_SBC_1
727:731
PPTSS
SPOP
0.971
More...
Q9Y4E6
WD repeat-containing protein 7
DEG_SPOP_SBC_1
936:940
PPTSS
SPOP
0.9515
More...