DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PRTSS
Uniprot ID:
Q06455
Source protein:
Protein CBFA2T1
Source gene:
RUNX1T1
Class:
DEG_SPOP_SBC_1
Location:
66:70
E3 ligase:
SPOP
DEGRON score:
0.7313
ASA_SCORE:
98.44
COIL:
0.923
CONS_SCORE:
0.5228
DSS_SCORE:
0.8243
HELIX:
0.021
FCONS_SCORE:
1.0248
RIG_SCORE:
0.6035
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R61G
TCGA-34-5234
LUSC
TCGA
PRTSS
DEG_SPOP_SBC_1
0.1944
p.P64H
TCGA-43-5670
LUSC
TCGA
PRTSS
DEG_SPOP_SBC_1
0.2778
p.P71L
TCGA-85-8287
LUSC
TCGA
PRTSS
DEG_SPOP_SBC_1
0.3056
p.T66S
TCGA-D5-5539
COAD
TCGA
PRTSS
DEG_SPOP_SBC_1
0.7116
p.P70L
TCGA-EB-A5UN
SKCM
TCGA
PRTSS
DEG_SPOP_SBC_1
0.7582
p.R78I
TCGA-EO-A22X
UCEC
TCGA
PRTSS
DEG_SPOP_SBC_1
0.1111
p.P68S
TCGA-VQ-AA6D
STAD
TCGA
PRTSS
DEG_SPOP_SBC_1
0.6752
p.S67C
DO51943
BLCA
ICGC
PRTSS
DEG_SPOP_SBC_1
0.7541
p.G63R
DO219917
DLBC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.25
p.Q75P
DO234346
ESAD
ICGC
PRTSS
DEG_SPOP_SBC_1
0.1944
p.P56Q
DO229022
LICA
ICGC
PRTSS
DEG_SPOP_SBC_1
0.0556
p.P57R
DO44668
LICA
ICGC
PRTSS
DEG_SPOP_SBC_1
0.0833
p.P64S
DO52303
LIHC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.2778
p.P64S
DO23130
LINC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.2778
p.S68F
DO52241
LIHC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.7982
p.S68F
DO38105
SKCM
ICGC
PRTSS
DEG_SPOP_SBC_1
0.7982
p.S68F
Sarc9371
bone
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.7982
p.S66P
DO23104
LINC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.6752
p.G63W
DO231719
LINC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.25
p.A80S
DO230929
LUSC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.0556
p.A80S
DO224572
LUSC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.0556
p.S65F
DO220879
MELA
ICGC
PRTSS
DEG_SPOP_SBC_1
0.3056
p.P78L
DO229149
NKTL
ICGC
PRTSS
DEG_SPOP_SBC_1
0.1111
p.S69P
DO229259
THCA
ICGC
PRTSS
DEG_SPOP_SBC_1
0.6752
p.S66Y
DO219771
UCEC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.712
p.S71Y
DO43202
UCEC
ICGC
PRTSS
DEG_SPOP_SBC_1
0.3056
p.P59A
ACH-000188
Head and Neck Cancer
CCLE
PRTSS
DEG_SPOP_SBC_1
0.1389
p.P59A
SCC-25
upper_aerodigestive_tract
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1389
p.T80K
ACH-000236
Colon/Colorectal Cancer
CCLE
PRTSS
DEG_SPOP_SBC_1
0.0556
p.T80K
SW1417
large_intestine
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.0556
p.P58L
ACH-000510
Lung Cancer
CCLE
PRTSS
DEG_SPOP_SBC_1
0.1111
p.P58L
NCI-H1299
lung
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1111
p.G79V
ACH-000790
Lung Cancer
CCLE
PRTSS
DEG_SPOP_SBC_1
0.0833
p.G79V
SHP-77
lung
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.0833
p.R67I
ACH-000993
Endometrial/Uterine Cancer
CCLE
PRTSS
DEG_SPOP_SBC_1
0.6991
p.P69L
NCI-H1299
lung
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.7582
p.S78F
Sarc9371
bone
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1111
p.G59V
SHP-77
lung
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1389
p.T60K
SW1417
large_intestine
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1667
p.P70A
SCC-25
upper_aerodigestive_tract
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.7503
p.T58K
5637
urinary_tract
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.1111
p.L62M
ACN
autonomic_ganglia
COSMIC
PRTSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with RUNX1T1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PRTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14526
F-BAR domain only protein 1
DEG_SPOP_SBC_1
416:420
PRTSS
SPOP
0.8831
More...
O95196
Chondroitin sulfate proteoglycan 5
DEG_SPOP_SBC_1
494:498
PRTSS
SPOP
0.9445
More...
P25054
Adenomatous polyposis coli protein
DEG_SPOP_SBC_1
2346:2350
PRTSS
SPOP
0.9898
More...
Q03111
Protein ENL
DEG_SPOP_SBC_1
316:320
PRTSS
SPOP
0.7245
More...
Q06455
Protein CBFA2T1
DEG_SPOP_SBC_1
66:70
PRTSS
SPOP
0.7313
More...
Q12778
Forkhead box protein O1
DEG_SPOP_SBC_1
315:319
PRTSS
SPOP
0.9972
More...
Q14162
Scavenger receptor class F member 1
DEG_SPOP_SBC_1
577:581
PRTSS
SPOP
0.8725
More...
Q6GPH4
XIAP-associated factor 1
DEG_SPOP_SBC_1
249:253
PRTSS
SPOP
0.8792
More...
Q6IQ55
Tau-tubulin kinase 2
DEG_SPOP_SBC_1
1161:1165
PRTSS
SPOP
0.8865
More...
Q6RVD6
Spermatogenesis-associated protein 8
DEG_SPOP_SBC_1
29:33
PRTSS
SPOP
0.8857
More...
Q92538
Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
DEG_SPOP_SBC_1
1462:1466
PRTSS
SPOP
0.9516
More...
Q96QH2
PML-RARA-regulated adapter molecule 1
DEG_SPOP_SBC_1
330:334
PRTSS
SPOP
0.9947
More...
Q9BRG2
SH2 domain-containing protein 3A
DEG_SPOP_SBC_1
176:180
PRTSS
SPOP
0.9677
More...
Q9C0B5
Palmitoyltransferase ZDHHC5
DEG_SPOP_SBC_1
581:585
PRTSS
SPOP
0.9948
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
354:358
PRTSS
SPOP
0.9618
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
778:782
PRTSS
SPOP
0.9406
More...
Q9H2D6
TRIO and F-actin-binding protein
DEG_SPOP_SBC_1
919:923
PRTSS
SPOP
0.9535
More...
Q9NYJ8
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2
DEG_SPOP_SBC_1
346:350
PRTSS
SPOP
0.9945
More...
Q9UIG0
Tyrosine-protein kinase BAZ1B
DEG_SPOP_SBC_1
461:465
PRTSS
SPOP
0.8829
More...
Q9ULC8
Palmitoyltransferase ZDHHC8
DEG_SPOP_SBC_1
639:643
PRTSS
SPOP
0.9525
More...
Q6ZVL6
UPF0606 protein KIAA1549L
DEG_SPOP_SBC_1
610:614
PRTSS
SPOP
0.9746
More...
Q76KD6
Speriolin
DEG_SPOP_SBC_1
390:394
PRTSS
SPOP
0.8987
More...
Q9BY89
Uncharacterized protein KIAA1671
DEG_SPOP_SBC_1
124:128
PRTSS
SPOP
0.9961
More...