Search results: The pahtway p4493 has 121 genes in the original annotation. Currently, there are 70 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
810CALML3CLPcalmodulin like 310p15.1CV:PGCnp
DMG:Wockner_2014
INTRACELLULAR SIGNAL TRANSDUCTION
SEROTONIN
3778KCNMA1BKTM | KCa1.1 | MaxiK | SAKCA | SLO | SLO-ALPHA | SLO1 | bA205K10.1 | mSLO1potassium calcium-activated channel subfamily M alpha 110q22.3CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
EXCITABILITY
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23279NUP160-nucleoporin 160kDa11p11.2CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
Ascano FMRP targets
8519IFITM19-27 | CD225 | DSPA2a | IFI17 | LEU13interferon induced transmembrane protein 111p15.5DMG:Montano_2016
Expression
PMID:cooccur
283131NEAT1LINC00084 | NCRNA00084 | TncRNA | VINCnuclear paraspeckle assembly transcript 1 (non-protein coding)11q13.1CV:PGCnp
DMG:Wockner_2014
4314MMP3CHDS6 | MMP-3 | SL-1 | STMY | STMY1 | STR1matrix metallopeptidase 311q22.3PMID:cooccur
4837NNMT-nicotinamide N-methyltransferase11q23.1CV:PGCnp
GSMA_I
PMID:cooccur
6653SORL1C11orf32 | LR11 | LRP9 | SORLA | SorLA-1 | gp250sortilin-related receptor, L(DLR class) A repeats containing11q23.2-q24.2CV:PGCnp
DMG:Montano_2016
GSMA_I
PMID:cooccur
CompositeSet
Darnell FMRP targets
64221ROBO3HGPPS | HGPS | RBIG1 | RIG1roundabout guidance receptor 311q24.2CV:PGCnp
DMG:Wockner_2014
GO_Annotation
9638FEZ1UNC-76fasciculation and elongation protein zeta 111q24.2Core
CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
Network
PMID:cooccur
894CCND2KIAK0002 | MPPH3cyclin D212p13CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
PMID:cooccur
5781PTPN11BPTP3 | CFC | JMML | METCDS | NS1 | PTP-1D | PTP2C | SH-PTP2 | SH-PTP3 | SHP2protein tyrosine phosphatase, non-receptor type 1112q24CV:PGCnp
GO_Annotation
Network
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanNRC
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Darnell FMRP targets
23316CUX2CDP2 | CUTL2cut like homeobox 212q24.12CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
4939OAS2-2'-5'-oligoadenylate synthetase 212q24.2CV:GWASdb
CV:PGCnp
3653IPWNCRNA00002imprinted in Prader-Willi syndrome (non-protein coding)15q11.2CV:PGCnp
PMID:cooccur
6447SCG57B2 | P7B2 | SGNE1 | SgVsecretogranin V15q13-q14CNV:YES
CV:PGCnp
GO_Annotation
NEUROTROPHIN SIGNALING
26585GREM1C15DUPq | CKTSF1B1 | CRAC1 | CRCS4 | DAND2 | DRM | DUP15q | GREMLIN | HMPS | HMPS1 | IHG-2 | MPSH | PIG2gremlin 1, DAN family BMP antagonist15q13.3CNV:YES
CV:PGCnp
GO_Annotation
7057THBS1THBS | THBS-1 | TSP | TSP-1 | TSP1thrombospondin 115q15CV:PGCnp
DNM:Xu_2012
PMID:cooccur
CompositeSet
2553GABPB1BABPB2 | E4TF1 | E4TF1-47 | E4TF1-53 | E4TF1B | GABPB | GABPB-1 | GABPB2 | NRF2B1 | NRF2B2GA binding protein transcription factor beta subunit 115q21.2CV:PGCnp
DMG:Jaffe_2016
771CA12CA-XII | CAXII | HsT18816 | T18816carbonic anhydrase XII15q22CV:PGCnp
DMG:Wockner_2014
64131XYLT1DBQD2 | PXYLT1 | XT-I | XT1 | XTI | XYLTIxylosyltransferase I16p12.3CV:PGCnp
DMG:Montano_2016
DMG:Wockner_2014
GSMA_IIE
1009CDH11CAD11 | CDHOB | OB | OSF-4cadherin 1116q21CV:PGCnp
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
1012CDH13CDHH | P105cadherin 1316q23.3CV:GWAScat
CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
PMID:cooccur
CELL ADHESION AND TRANSSYNAPTIC SIGNALING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
1440CSF3C17orf33 | CSF3OS | GCSFcolony stimulating factor 317q11.2-q12CV:PGCnp
8677STX10SYN10 | hsyn10syntaxin 1019p13.2CV:PGCnp
6279S100A860B8AG | CAGA | CFAG | CGLA | CP-10 | L1Ag | MA387 | MIF | MRP8 | NIF | P8S100 calcium binding protein A81q21GSMA_I
GSMA_IIA
PMID:cooccur
6280S100A960B8AG | CAGB | CFAG | CGLB | L1AG | LIAG | MAC387 | MIF | MRP14 | NIF | P14S100 calcium binding protein A91q21CV:PGCnp
GSMA_I
GSMA_IIA
PMID:cooccur
G2Cdb.human_clathrin
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
5743PTGS2COX-2 | COX2 | GRIPGHS | PGG/HS | PGHS-2 | PHS-2 | hCox-2prostaglandin-endoperoxide synthase 21q25.2-q25.3Association
CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
182JAG1AGS | AHD | AWS | CD339 | HJ1 | JAGL1jagged 120p12.1-p11.23CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
GO_Annotation
GSMA_I
PMID:cooccur
Ascano FMRP targets
5621PRNPASCR | AltPrP | CD230 | CJD | GSS | KURU | PRIP | PrP | PrP27-30 | PrP33-35C | PrPc | p27-30prion protein20p13CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
DMG:vanEijk_2014
Network
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
6431SRSF6B52 | HEL-S-91 | SFRS6 | SRP55serine/arginine-rich splicing factor 620q12-q13.1CV:PGCnp
Expression
8675STX16SYN16syntaxin 1620q13.32CV:PGCnp
GO_Annotation
INTRACELLULAR TRAFFICKING
4599MX1IFI-78K | IFI78 | MX | MxAMX dynamin like GTPase 121q22.3CV:PGCnp
PMID:cooccur
7039TGFATFGAtransforming growth factor alpha2p13CV:PGCnp
DMG:Montano_2016
Network
7447VSNL1HLP3 | HPCAL3 | HUVISL1 | VILIP | VILIP-1visinin like 12p24.3CV:PGCnp
PMID:cooccur
INTRACELLULAR SIGNAL TRANSDUCTION
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
CompositeSet
316AOX1AO | AOH1aldehyde oxidase 12q33CV:PGCnp
DNM:Fromer_2014
CompositeSet
2335FN1CIG | ED-B | FINC | FN | FNZ | GFND | GFND2 | LETS | MSFfibronectin 12q34CV:PGCnp
DNM:Fromer_2014
DNM:Guipponi_2014
GR_Ng
GSMA_IIA
GSMA_IIE
PMID:cooccur
CompositeSet
5270SERPINE2GDN | GDNPF | PI-7 | PI7 | PN-1 | PN1 | PNIserpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 22q36.1CV:PGCnp
DMG:Wockner_2014
GO_Annotation
GSMA_IIA
GSMA_IIE
G2Cdb.humanPSP
55022PID1HMFN2073 | NYGGF4 | P-CLI1 | PCLI1phosphotyrosine interaction domain containing 12q36.3CV:GWAScat
CV:GWASdb
CV:PGCnp
9497SLC4A7NBC2 | NBC3 | NBCN1 | SBC2 | SLC4A6solute carrier family 4 member 73p22CV:PGCnp
GO_Annotation
GSMA_I
7048TGFBR2AAT3 | FAA3 | LDS1B | LDS2 | LDS2B | MFS2 | RIIC | TAAD2 | TGFR-2 | TGFbeta-RIItransforming growth factor beta receptor II3p22CV:PGCnp
GO_Annotation
GSMA_I
PMID:cooccur
5868RAB5ARAB5RAB5A, member RAS oncogene family3p24.3CV:PGCnp
GSMA_I
Network
INTRACELLULAR TRAFFICKING
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.humanPSD
G2Cdb.humanPSP
3269HRH1H1-R | H1R | HH1R | hisH1histamine receptor H13p25ADT:Sun_2012
Association
CV:GWASdb
CV:PGCnp
GR_COR
GR_WM
GSMA_I
PMID:cooccur
131566DCBLD2CLCP1 | ESDNdiscoidin, CUB and LCCL domain containing 23q12.1|3CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
GSMA_IIA
GSMA_IIE
8626TP63AIS | B(p51A) | B(p51B) | EEC3 | KET | LMS | NBP | OFC8 | RHS | SHFM4 | TP53CP | TP53L | TP73L | p40 | p51 | p53CP | p63 | p73H | p73Ltumor protein p633q28CV:PGCnp
CV:PheWAS
Network
9076CLDN1CLD1 | ILVASC | SEMP1claudin 13q28-q29CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
5099PCDH7BH-Pcdh | BHPCDH | PPP1R120protocadherin 74p15CV:GWASdb
CV:PGCnp
PMID:cooccur
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
9948WDR1AIP1 | HEL-S-52 | NORI-1WD repeat domain 14p16.1CV:GWASdb
CV:PGCnp
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
23022PALLDCGI-151 | CGI151 | MYN | PNCA1 | SIH002palladin, cytoskeletal associated protein4q32.3CV:GWAScat
CV:PGCnp
Expression
PMID:cooccur
3157HMGCS1HMGCS3-hydroxy-3-methylglutaryl-CoA synthase 15p12CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
10468FSTFSfollistatin5q11.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
10769PLK2SNK | hPlk2 | hSNKpolo like kinase 25q12.1-q13.2CV:PGCnp
4131MAP1BFUTSCH | MAP5 | PPP1R102microtubule associated protein 1B5q13CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mGluR5
G2Cdb.human_Synaptosome
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
6695SPOCK1SPOCK | TESTICAN | TIC1sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 15q31.2CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
1809DPYSL3CRMP-4 | CRMP4 | DRP-3 | DRP3 | LCRMP | ULIP | ULIP-1dihydropyrimidinase like 35q32CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
STRUCTURAL PLASTICITY
CompositeSet
Ascano FMRP targets
2878GPX3GPx-P | GSHPx-3 | GSHPx-Pglutathione peroxidase 35q33.1CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
PMID:cooccur
4121MAN1A1HUMM3 | HUMM9 | MAN9mannosidase alpha class 1A member 16q22CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
5796PTPRKR-PTP-kappaprotein tyrosine phosphatase, receptor type K6q22.2-q22.3CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
10652YKT6-YKT6 v-SNARE homolog (S. cerevisiae)7p15.1CV:PGCnp
GO_Annotation
1595CYP51A1CP51 | CYP51 | CYPL1 | LDM | P450-14DM | P450L1cytochrome P450 family 51 subfamily A member 17q21.2DMG:Jaffe_2016
DMG:Wockner_2014
813CALU-calumenin7q32.1CV:PGCnp
DMG:Jaffe_2016
800CALD1CDM | H-CAD | HCAD | L-CAD | LCAD | NAG22caldesmon 17q33CV:PGCnp
DMG:Wockner_2014
Expression
Network
6422SFRP1FRP | FRP-1 | FRP1 | FrzA | SARP2secreted frizzled-related protein 18p11.21Association
CV:PGCnp
PMID:cooccur
1846DUSP4HVH2 | MKP-2 | MKP2 | TYPdual specificity phosphatase 48p12-p11CV:GWASdb
CV:PGCnp
DMG:Jaffe_2016
GSMA_IIA
GSMA_IIE
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
4747NEFLCMT1F | CMT2E | NF-L | NF68 | NFL | PPP1R110neurofilament, light polypeptide8p21CV:PGCnp
DMG:Jaffe_2016
GO_Annotation
GSMA_I
GSMA_IIA
GSMA_IIE
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_TAP-PSD-95-CORE
G2Cdb.humanNRC
793CALB1CALB | D-28Kcalbindin 18q21.3CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
5646PRSS3MTG | PRSS4 | T9 | TRY3 | TRY4protease, serine 39p11.2CV:PGCnp
GO_Annotation
2683B4GALT1B4GAL-T1 | CDG2D | GGTB2 | GT1 | GTB | beta4Gal-T1UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 19p13CV:PGCnp
1993ELAVL2HEL-N1 | HELN1 | HUBELAV like neuron-specific RNA binding protein 29p21CV:GWASdb
CV:PGCnp
PMID:cooccur
1654DDX3XCAP-Rf | DBX | DDX14 | DDX3 | HLP2 | MRX102DEAD-box helicase 3, X-linkedXp11.3-p11.23CV:GWASdb
CV:PGCnp
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
Potential synaptic genes