DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PATTT
Uniprot ID:
P51587
Source protein:
Breast cancer type 2 susceptibility protein
Source gene:
BRCA2
Class:
DEG_SPOP_SBC_1
Location:
564:568
E3 ligase:
SPOP
DEGRON score:
0.9146
ASA_SCORE:
76.42
COIL:
0.7232
CONS_SCORE:
0.3438
DSS_SCORE:
0.3492
HELIX:
0.2018
FCONS_SCORE:
1.0611
RIG_SCORE:
0.7817
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C554F
TCGA-73-4662
LUAD
TCGA
PATTT
DEG_SPOP_SBC_1
0.0556
p.C554F
DO229022
LICA
ICGC
PATTT
DEG_SPOP_SBC_1
0.0556
p.C554F
DO24790
LUAD
ICGC
PATTT
DEG_SPOP_SBC_1
0.0556
p.A577S
TCGA-97-7554
LUAD
TCGA
PATTT
DEG_SPOP_SBC_1
0.0833
p.A577S
DO23592
LUAD
ICGC
PATTT
DEG_SPOP_SBC_1
0.0833
p.K575N
TCGA-A5-A2K5
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.25
p.K575N
DO41379
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.25
p.Q569H
TCGA-AP-A0LM
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.3056
p.Q569H
DO43306
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.3056
p.S571F
TCGA-AP-A0LM
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.25
p.S571F
DO43306
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.25
p.L557V
TCGA-AX-A05Z
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.1389
p.L557V
DO40884
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.1389
p.P555L
TCGA-EE-A29C
SKCM
TCGA
PATTT
DEG_SPOP_SBC_1
0.0833
p.P555L
DO222727
MELA
ICGC
PATTT
DEG_SPOP_SBC_1
0.0833
p.P555L
DO38028
SKCM
ICGC
PATTT
DEG_SPOP_SBC_1
0.0833
p.N556S
TCGA-P4-AAVM
KIRP
TCGA
PATTT
DEG_SPOP_SBC_1
0.1111
p.N556S
DO219695
KIRP
ICGC
PATTT
DEG_SPOP_SBC_1
0.1111
p.S562N
DO230342
COCA
ICGC
PATTT
DEG_SPOP_SBC_1
0.2778
p.S562N
ACH-000578
Lung Cancer
CCLE
PATTT
DEG_SPOP_SBC_1
0.2778
p.G578D
SIDM00140
Melanoma
GDSC
PATTT
DEG_SPOP_SBC_1
0.0556
p.G578D
ACH-000968
Skin Cancer
CCLE
PATTT
DEG_SPOP_SBC_1
0.0556
p.G578D
COLO-792
skin
COSMIC
PATTT
DEG_SPOP_SBC_1
0.0556
Drug responses associated with BRCA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43670
BUB3-interacting and GLEBS motif-containing protein ZNF207
DEG_SPOP_SBC_1
311:315
PATTT
SPOP
0.8955
More...
P31645
Sodium-dependent serotonin transporter
DEG_SPOP_SBC_1
64:68
PATTT
SPOP
0.7561
More...
P51587
Breast cancer type 2 susceptibility protein
DEG_SPOP_SBC_1
564:568
PATTT
SPOP
0.9146
More...
Q03001
Dystonin
DEG_SPOP_SBC_1
7436:7440
PATTT
SPOP
0.9065
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
498:502
PATTT
SPOP
0.9968
More...
Q6EMK4
Vasorin
DEG_SPOP_SBC_1
350:354
PATTT
SPOP
0.9976
More...
Q6ISU1
Pre T-cell antigen receptor alpha
DEG_SPOP_SBC_1
182:186
PATTT
SPOP
0.9264
More...
Q765P7
Protein MTSS 2
DEG_SPOP_SBC_1
313:317
PATTT
SPOP
0.6279
More...
Q86UK7
E3 ubiquitin-protein ligase ZNF598
DEG_SPOP_SBC_1
729:733
PATTT
SPOP
0.9959
More...
Q8N3V7
Synaptopodin
DEG_SPOP_SBC_1
407:411
PATTT
SPOP
0.998
More...
Q8N9I0
Synaptotagmin-2
DEG_SPOP_SBC_1
15:19
PATTT
SPOP
0.7121
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1537:1541
PATTT
SPOP
0.9939
More...
Q8TAQ2
SWI/SNF complex subunit SMARCC2
DEG_SPOP_SBC_1
1148:1152
PATTT
SPOP
0.9655
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7725:7729
PATTT
SPOP
0.9548
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
62:66
PATTT
SPOP
0.9768
More...
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
DEG_SPOP_SBC_1
879:883
PATTT
SPOP
0.9977
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
695:699
PATTT
SPOP
0.9941
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
1042:1046
PATTT
SPOP
0.8197
More...
Q9H8Y8
Golgi reassembly-stacking protein 2
DEG_SPOP_SBC_1
397:401
PATTT
SPOP
0.999
More...
Q9NYI0
PH and SEC7 domain-containing protein 3
DEG_SPOP_SBC_1
921:925
PATTT
SPOP
0.9983
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
428:432
PATTT
SPOP
0.947
More...
Q9P1Z0
Zinc finger and BTB domain-containing protein 4
DEG_SPOP_SBC_1
78:82
PATTT
SPOP
0.9893
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
2539:2543
PATTT
SPOP
0.77
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
1824:1828
PATTT
SPOP
0.9363
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
220:224
PATTT
SPOP
0.9942
More...