DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PATTT
Uniprot ID:
Q96KR1
Source protein:
Zinc finger RNA-binding protein
Source gene:
ZFR
Class:
DEG_SPOP_SBC_1
Location:
220:224
E3 ligase:
SPOP
DEGRON score:
0.9942
ASA_SCORE:
80.54
COIL:
0.8716
CONS_SCORE:
0.3495
DSS_SCORE:
0.3618
HELIX:
0.0378
FCONS_SCORE:
1.078
RIG_SCORE:
0.725
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S226F
TCGA-AJ-A3BH
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.2778
p.S226F
DO41638
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.2778
p.T222I
TCGA-D3-A2JF
SKCM
TCGA
PATTT
DEG_SPOP_SBC_1
0.7078
p.T222I
DO38153
SKCM
ICGC
PATTT
DEG_SPOP_SBC_1
0.7078
p.P218T
DO229038
LICA
ICGC
PATTT
DEG_SPOP_SBC_1
0.2778
p.V234A
DO45049
LINC
ICGC
PATTT
DEG_SPOP_SBC_1
0.0556
p.K214N
DO219881
SKCA
ICGC
PATTT
DEG_SPOP_SBC_1
0.2778
p.T222S
SIDM00733
Small Cell Lung Carcinoma
GDSC
PATTT
DEG_SPOP_SBC_1
0.6005
p.T222S
ACH-000525
Lung Cancer
CCLE
PATTT
DEG_SPOP_SBC_1
0.6005
p.T222S
NCI-H2171
lung
COSMIC
PATTT
DEG_SPOP_SBC_1
0.6005
Drug responses associated with ZFR mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43670
BUB3-interacting and GLEBS motif-containing protein ZNF207
DEG_SPOP_SBC_1
311:315
PATTT
SPOP
0.8955
More...
P31645
Sodium-dependent serotonin transporter
DEG_SPOP_SBC_1
64:68
PATTT
SPOP
0.7561
More...
P51587
Breast cancer type 2 susceptibility protein
DEG_SPOP_SBC_1
564:568
PATTT
SPOP
0.9146
More...
Q03001
Dystonin
DEG_SPOP_SBC_1
7436:7440
PATTT
SPOP
0.9065
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
498:502
PATTT
SPOP
0.9968
More...
Q6EMK4
Vasorin
DEG_SPOP_SBC_1
350:354
PATTT
SPOP
0.9976
More...
Q6ISU1
Pre T-cell antigen receptor alpha
DEG_SPOP_SBC_1
182:186
PATTT
SPOP
0.9264
More...
Q765P7
Protein MTSS 2
DEG_SPOP_SBC_1
313:317
PATTT
SPOP
0.6279
More...
Q86UK7
E3 ubiquitin-protein ligase ZNF598
DEG_SPOP_SBC_1
729:733
PATTT
SPOP
0.9959
More...
Q8N3V7
Synaptopodin
DEG_SPOP_SBC_1
407:411
PATTT
SPOP
0.998
More...
Q8N9I0
Synaptotagmin-2
DEG_SPOP_SBC_1
15:19
PATTT
SPOP
0.7121
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1537:1541
PATTT
SPOP
0.9939
More...
Q8TAQ2
SWI/SNF complex subunit SMARCC2
DEG_SPOP_SBC_1
1148:1152
PATTT
SPOP
0.9655
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7725:7729
PATTT
SPOP
0.9548
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
62:66
PATTT
SPOP
0.9768
More...
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
DEG_SPOP_SBC_1
879:883
PATTT
SPOP
0.9977
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
695:699
PATTT
SPOP
0.9941
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
1042:1046
PATTT
SPOP
0.8197
More...
Q9H8Y8
Golgi reassembly-stacking protein 2
DEG_SPOP_SBC_1
397:401
PATTT
SPOP
0.999
More...
Q9NYI0
PH and SEC7 domain-containing protein 3
DEG_SPOP_SBC_1
921:925
PATTT
SPOP
0.9983
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
428:432
PATTT
SPOP
0.947
More...
Q9P1Z0
Zinc finger and BTB domain-containing protein 4
DEG_SPOP_SBC_1
78:82
PATTT
SPOP
0.9893
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
2539:2543
PATTT
SPOP
0.77
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
1824:1828
PATTT
SPOP
0.9363
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
220:224
PATTT
SPOP
0.9942
More...