DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PATTT
Uniprot ID:
Q9H2X6
Source protein:
Homeodomain-interacting protein kinase 2
Source gene:
HIPK2
Class:
DEG_SPOP_SBC_1
Location:
62:66
E3 ligase:
SPOP
DEGRON score:
0.9768
ASA_SCORE:
86.14
COIL:
0.9138
CONS_SCORE:
0.3419
DSS_SCORE:
0.4989
HELIX:
0.0414
FCONS_SCORE:
1.0824
RIG_SCORE:
0.7004
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S52G
TCGA-D1-A174
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.0556
p.S52G
DO40900
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.0556
p.P72L
TCGA-DD-A4NO
LIHC
TCGA
PATTT
DEG_SPOP_SBC_1
0.1667
p.P72L
DO45013
LIHC
ICGC
PATTT
DEG_SPOP_SBC_1
0.1667
p.S54C
TCGA-ED-A7PZ
LIHC
TCGA
PATTT
DEG_SPOP_SBC_1
0.1111
p.S54C
DO48532
LIHC
ICGC
PATTT
DEG_SPOP_SBC_1
0.1111
p.Q53H
TCGA-ED-A7PZ
LIHC
TCGA
PATTT
DEG_SPOP_SBC_1
0.0833
p.Q53H
TCGA-L5-A8NQ
ESCA
TCGA
PATTT
DEG_SPOP_SBC_1
0.0833
p.Q53H
DO48532
LIHC
ICGC
PATTT
DEG_SPOP_SBC_1
0.0833
p.P72Q
TCGA-QS-A5YR
UCEC
TCGA
PATTT
DEG_SPOP_SBC_1
0.1667
p.P72Q
DO50081
UCEC
ICGC
PATTT
DEG_SPOP_SBC_1
0.1667
p.P62Q
TCGA-VR-AA7B
ESCA
TCGA
PATTT
DEG_SPOP_SBC_1
0.7035
p.V67I
SIDM00789
Colorectal Carcinoma
GDSC
PATTT
DEG_SPOP_SBC_1
0.3056
p.V67I
HCT-15
large_intestine
COSMIC
PATTT
DEG_SPOP_SBC_1
0.3056
p.I57T
ACH-000908
Gastric Cancer
CCLE
PATTT
DEG_SPOP_SBC_1
0.1944
p.V60I
HCT-15
large_intestine
COSMIC
PATTT
DEG_SPOP_SBC_1
0.2778
Drug responses associated with HIPK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00926
UNCLASSIFIED|lung_NSCLC_not_specified
p.E136D (No)
GDSC
PI-103
186.6479
SIDM00951
LAML|acute_myeloid_leukaemia
p.D502N (No)
GDSC
PI-103
1.081
SIDM00951
LAML|acute_myeloid_leukaemia
p.I227T (No)
GDSC
PI-103
1.081
SIDM00939
UNCLASSIFIED|lung_NSCLC_not_specified
p.G1184V (No)
GDSC
PI-103
0.1231
SIDM00680
COREAD|large_intestine
p.R554Q (No)
GDSC
PI-103
131.335
SIDM01045
UCEC|endometrium
p.L59fs*56 (Yes)
GDSC
PI-103
3.7811
SIDM00499
PRAD|prostate
p.G45D (No)
GDSC
PI-103
0.3537
SIDM00145
ALL|lymphoblastic_leukemia
p.N914K (No)
GDSC
PI-103
0.1685
SIDM00108
SKCM|melanoma
p.H322Q (No)
GDSC
PI-103
2.1752
SIDM00351
HNSC|head_and_neck
p.R868W (No)
GDSC
PI-103
1.0036
SIDM00976
SKCM|melanoma
p.G348R (No)
GDSC
PI-103
0.2229
SIDM00045
STAD|stomach
p.C658F (No)
GDSC
PI-103
0.7557
SIDM01107
SKCM|melanoma
p.T602P (No)
GDSC
PI-103
57.4273
SIDM01007
ALL|lymphoblastic_leukemia
p.H807R (No)
GDSC
PI-103
0.2023
SIDM01007
ALL|lymphoblastic_leukemia
p.K805R (No)
GDSC
PI-103
0.2023
SIDM01073
UNCLASSIFIED|hairy_cell_leukaemia
p.S142N (No)
GDSC
PI-103
0.2031
SIDM00742
LUAD|lung_NSCLC_adenocarcinoma
p.H760R (No)
GDSC
PI-103
2.0651
SIDM00565
HNSC|head_and_neck
p.V737M (No)
GDSC
PI-103
2.2952
SIDM00443
DLBC|B_cell_lymphoma
p.R941C (No)
GDSC
PI-103
0.0219
SIDM00377
UNCLASSIFIED|uterus
p.H540R (No)
GDSC
PI-103
2.6284
SIDM00498
COREAD|large_intestine
p.I603V (No)
GDSC
PI-103
3.2887
SIDM00793
UNCLASSIFIED|Burkitt_lymphoma
p.A624V (No)
GDSC
PI-103
0.0783
SIDM01045
UCEC|endometrium
p.V94E (No)
GDSC
PI-103
3.7811
SIDM00946
ALL|T_cell_leukemia
p.V50M (No)
GDSC
PI-103
0.526
SIDM00864
CESC|cervix
p.I875V (No)
GDSC
PI-103
23.1182
SIDM00523
SCLC|lung_small_cell_carcinoma
p.R433S (No)
GDSC
PI-103
131.0205
SIDM00217
COREAD|large_intestine
p.A1178V (No)
GDSC
PI-103
1.8634
SIDM00217
COREAD|large_intestine
p.E896K (No)
GDSC
PI-103
1.8634
SIDM01003
ALL|lymphoblastic_leukemia
p.R497Q (No)
GDSC
PI-103
0.2158
SIDM00216
COREAD|large_intestine
p.I146T (No)
GDSC
PI-103
20.9452
SIDM00596
UCEC|endometrium
p.R498Q (No)
GDSC
PI-103
22.6646
SIDM00282
COREAD|large_intestine
p.A719S (No)
GDSC
PI-103
28.6572
SIDM00660
COREAD|large_intestine
p.A512V (No)
GDSC
PI-103
0.5852
SIDM00955
SKCM|melanoma
p.T1022N (No)
GDSC
PI-103
14.8056
SIDM00783
COREAD|large_intestine
p.R792W (No)
GDSC
PI-103
0.5867
SIDM00845
UNCLASSIFIED|Burkitt_lymphoma
p.I33V (No)
GDSC
PI-103
0.0974
SIDM00789
COREAD|large_intestine
p.V67I (Yes)
GDSC
PI-103
0.8427
SIDM00534
COREAD|large_intestine
p.V1121A (No)
GDSC
PI-103
137.3337
SIDM00149
SKCM|melanoma
p.M635I (No)
GDSC
PI-103
3.9173
SIDM00545
SKCM|melanoma
p.R1056Q (No)
GDSC
PI-103
9.7833
SIDM00545
SKCM|melanoma
p.H524Y (No)
GDSC
PI-103
9.7833
SIDM00114
MESO|mesothelioma
p.L716I (No)
GDSC
PI-103
6.8017
SIDM01154
ALL|lymphoblastic_T_cell_leukaemia
p.R133H (No)
GDSC
PI-103
0.976
SIDM00451
ALL|lymphoblastic_T_cell_leukaemia
p.L108F (No)
GDSC
PI-103
0.2536
SIDM00339
LUAD|lung_NSCLC_adenocarcinoma
p.S317I (No)
GDSC
PI-103
17.6642
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.F500V (No)
GDSC
PI-103
1.0649
SIDM01018
UNCLASSIFIED|Hodgkin_lymphoma
p.Y468N (No)
GDSC
PI-103
1.0649
SIDM00537
COREAD|large_intestine
p.T125A (No)
GDSC
PI-103
32.6383
SIDM00799
GBM|glioma
p.S1002Y (No)
GDSC
PI-103
54.1746
SIDM00496
THCA|thyroid
p.Q747K (No)
GDSC
PI-103
0.4742
SIDM00878
BRCA|breast
p.R833C (No)
GDSC
PI-103
0.1835
All proteins holding degron of PATTT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43670
BUB3-interacting and GLEBS motif-containing protein ZNF207
DEG_SPOP_SBC_1
311:315
PATTT
SPOP
0.8955
More...
P31645
Sodium-dependent serotonin transporter
DEG_SPOP_SBC_1
64:68
PATTT
SPOP
0.7561
More...
P51587
Breast cancer type 2 susceptibility protein
DEG_SPOP_SBC_1
564:568
PATTT
SPOP
0.9146
More...
Q03001
Dystonin
DEG_SPOP_SBC_1
7436:7440
PATTT
SPOP
0.9065
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
498:502
PATTT
SPOP
0.9968
More...
Q6EMK4
Vasorin
DEG_SPOP_SBC_1
350:354
PATTT
SPOP
0.9976
More...
Q6ISU1
Pre T-cell antigen receptor alpha
DEG_SPOP_SBC_1
182:186
PATTT
SPOP
0.9264
More...
Q765P7
Protein MTSS 2
DEG_SPOP_SBC_1
313:317
PATTT
SPOP
0.6279
More...
Q86UK7
E3 ubiquitin-protein ligase ZNF598
DEG_SPOP_SBC_1
729:733
PATTT
SPOP
0.9959
More...
Q8N3V7
Synaptopodin
DEG_SPOP_SBC_1
407:411
PATTT
SPOP
0.998
More...
Q8N9I0
Synaptotagmin-2
DEG_SPOP_SBC_1
15:19
PATTT
SPOP
0.7121
More...
Q8NFC6
Biorientation of chromosomes in cell division protein 1-like 1
DEG_SPOP_SBC_1
1537:1541
PATTT
SPOP
0.9939
More...
Q8TAQ2
SWI/SNF complex subunit SMARCC2
DEG_SPOP_SBC_1
1148:1152
PATTT
SPOP
0.9655
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
7725:7729
PATTT
SPOP
0.9548
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
62:66
PATTT
SPOP
0.9768
More...
Q9H3S7
Tyrosine-protein phosphatase non-receptor type 23
DEG_SPOP_SBC_1
879:883
PATTT
SPOP
0.9977
More...
Q9H422
Homeodomain-interacting protein kinase 3
DEG_SPOP_SBC_1
695:699
PATTT
SPOP
0.9941
More...
Q9H7N4
Splicing factor, arginine/serine-rich 19
DEG_SPOP_SBC_1
1042:1046
PATTT
SPOP
0.8197
More...
Q9H8Y8
Golgi reassembly-stacking protein 2
DEG_SPOP_SBC_1
397:401
PATTT
SPOP
0.999
More...
Q9NYI0
PH and SEC7 domain-containing protein 3
DEG_SPOP_SBC_1
921:925
PATTT
SPOP
0.9983
More...
Q9NZM4
BRD4-interacting chromatin-remodeling complex-associated protein
DEG_SPOP_SBC_1
428:432
PATTT
SPOP
0.947
More...
Q9P1Z0
Zinc finger and BTB domain-containing protein 4
DEG_SPOP_SBC_1
78:82
PATTT
SPOP
0.9893
More...
Q9UKN1
Mucin-12
DEG_SPOP_SBC_1
2539:2543
PATTT
SPOP
0.77
More...
Q9Y6J0
Calcineurin-binding protein cabin-1
DEG_SPOP_SBC_1
1824:1828
PATTT
SPOP
0.9363
More...
Q96KR1
Zinc finger RNA-binding protein
DEG_SPOP_SBC_1
220:224
PATTT
SPOP
0.9942
More...