DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PGSST
Uniprot ID:
P17948
Source protein:
Vascular endothelial growth factor receptor 1
Source gene:
FLT1
Class:
DEG_SPOP_SBC_1
Location:
711:715
E3 ligase:
SPOP
DEGRON score:
0.6649
ASA_SCORE:
52.56
COIL:
0.5508
CONS_SCORE:
0.4202
DSS_SCORE:
0.4236
HELIX:
0.0164
FCONS_SCORE:
0.9749
RIG_SCORE:
0.6986
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T711M
DO35226
PACA
ICGC
PGSST
DEG_SPOP_SBC_1
0.7423
p.T711M
DO42977
UCEC
ICGC
PGSST
DEG_SPOP_SBC_1
0.7423
p.T711M
DO41903
UCEC
ICGC
PGSST
DEG_SPOP_SBC_1
0.7423
p.S714N
DO50970
LICA
ICGC
PGSST
DEG_SPOP_SBC_1
0.7069
p.G712R
DO220911
MELA
ICGC
PGSST
DEG_SPOP_SBC_1
0.6457
p.S716L
DO222363
MELA
ICGC
PGSST
DEG_SPOP_SBC_1
0.3056
p.S716L
DO43907
UCEC
ICGC
PGSST
DEG_SPOP_SBC_1
0.3056
p.E719Q
ACH-002024
Colon/Colorectal Cancer
CCLE
PGSST
DEG_SPOP_SBC_1
0.2222
p.P720S
DO220073
SARC
ICGC
PGSST
DEG_SPOP_SBC_1
0.1944
p.P705T
DO229041
LICA
ICGC
PGSST
DEG_SPOP_SBC_1
0.1667
p.P705H
DO46542
OV
ICGC
PGSST
DEG_SPOP_SBC_1
0.1667
p.V721A
SIDM00193
Colorectal Carcinoma
GDSC
PGSST
DEG_SPOP_SBC_1
0.1667
p.V721A
ACH-000991
Colon/Colorectal Cancer
CCLE
PGSST
DEG_SPOP_SBC_1
0.1667
p.V721A
SNU-81
large_intestine
COSMIC
PGSST
DEG_SPOP_SBC_1
0.1667
p.E704K
DO50882
LICA
ICGC
PGSST
DEG_SPOP_SBC_1
0.1389
p.S723A
DO41361
UCEC
ICGC
PGSST
DEG_SPOP_SBC_1
0.1111
p.E723K
ACH-001408
Bladder Cancer
CCLE
PGSST
DEG_SPOP_SBC_1
0.1111
Showing 1 to 17 of 17 entries
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Drug responses associated with FLT1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
SIDM00693
BLCA|bladder
p.L1061V (No)
GDSC
Midostaurin
1.7165
SIDM00693
BLCA|bladder
p.L1061V (No)
GDSC
Cabozantinib
32.8868
SIDM00693
BLCA|bladder
p.L1061V (No)
GDSC
Linifanib
8.1207
SIDM00693
BLCA|bladder
p.L1061V (No)
GDSC
Tivozanib
1.8598
SIDM00693
BLCA|bladder
p.L1061V (No)
GDSC
Cediranib
147.05
SIDM00272
BRCA|breast
p.S788F (No)
GDSC
Midostaurin
6.4387
SIDM00272
BRCA|breast
p.S788F (No)
GDSC
Cabozantinib
33.5864
SIDM00272
BRCA|breast
p.S788F (No)
GDSC
Linifanib
8.2605
SIDM00272
BRCA|breast
p.S788F (No)
GDSC
Tivozanib
2.431
SIDM00272
BRCA|breast
p.S788F (No)
GDSC
Cediranib
13.538
SIDM00673
BRCA|breast
p.I623M (No)
GDSC
Midostaurin
1.6137
SIDM00673
BRCA|breast
p.I623M (No)
GDSC
Cabozantinib
37.461
SIDM00673
BRCA|breast
p.I623M (No)
GDSC
Linifanib
11.3311
SIDM00673
BRCA|breast
p.I623M (No)
GDSC
Tivozanib
1.5913
SIDM00673
BRCA|breast
p.I623M (No)
GDSC
Cediranib
28.435
SIDM00135
BRCA|breast
p.C1018Y (No)
GDSC
Midostaurin
1.677
SIDM00135
BRCA|breast
p.C1018Y (No)
GDSC
Cabozantinib
79.8364
SIDM00135
BRCA|breast
p.C1018Y (No)
GDSC
Linifanib
16.1299
SIDM00135
BRCA|breast
p.C1018Y (No)
GDSC
Tivozanib
2.0243
SIDM00135
BRCA|breast
p.C1018Y (No)
GDSC
Cediranib
2.468
SIDM00892
BRCA|breast
p.D987E (No)
GDSC
Midostaurin
7.5497
SIDM00892
BRCA|breast
p.D987E (No)
GDSC
Cabozantinib
267.6604
SIDM00892
BRCA|breast
p.D987E (No)
GDSC
Linifanib
32.0276
SIDM00892
BRCA|breast
p.D987E (No)
GDSC
Tivozanib
6.3583
SIDM00892
BRCA|breast
p.D987E (No)
GDSC
Cediranib
191.15
Showing 1 to 25 of 301 entries
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All proteins holding degron of PGSST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96L96
Alpha-protein kinase 3
DEG_SPOP_SBC_1
77:81
PGSST
SPOP
0.9946
More...
Q9NZB2
Constitutive coactivator of PPAR-gamma-like protein 1
DEG_SPOP_SBC_1
454:458
PGSST
SPOP
0.9977
More...
O75956
Cyclin-dependent kinase 2-associated protein 2
DEG_SPOP_SBC_1
14:18
PGSST
SPOP
0.9967
More...
P18146
Early growth response protein 1
DEG_SPOP_SBC_1
477:481
PGSST
SPOP
0.7875
More...
P52799
Ephrin-B2
DEG_SPOP_SBC_1
204:208
PGSST
SPOP
0.573
More...
Q9C0E2
Exportin-4
DEG_SPOP_SBC_1
522:526
PGSST
SPOP
0.9799
More...
Q9UKD1
Glucocorticoid modulatory element-binding protein 2
DEG_SPOP_SBC_1
495:499
PGSST
SPOP
0.6991
More...
Q9UQC2
GRB2-associated-binding protein 2
DEG_SPOP_SBC_1
457:461
PGSST
SPOP
0.9866
More...
Q14541
Hepatocyte nuclear factor 4-gamma
DEG_SPOP_SBC_1
122:126
PGSST
SPOP
0.5473
More...
P49639
Homeobox protein Hox-A1
DEG_SPOP_SBC_1
323:327
PGSST
SPOP
0.9865
More...
Q13164
Mitogen-activated protein kinase 7
DEG_SPOP_SBC_1
676:680
PGSST
SPOP
0.9143
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
1949:1953
PGSST
SPOP
0.9296
More...
O95665
Neurotensin receptor type 2
DEG_SPOP_SBC_1
246:250
PGSST
SPOP
0.8617
More...
Q8IVI9
Nostrin
DEG_SPOP_SBC_1
426:430
PGSST
SPOP
0.6311
More...
Q96HA1
Nuclear envelope pore membrane protein POM 121
DEG_SPOP_SBC_1
1118:1122
PGSST
SPOP
0.981
More...
Q5W0B1
ORC ubiquitin ligase 1
DEG_SPOP_SBC_1
302:306
PGSST
SPOP
0.9546
More...
Q96M63
Outer dynein arm-docking complex subunit 1
DEG_SPOP_SBC_1
660:664
PGSST
SPOP
0.9788
More...
O60741
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
DEG_SPOP_SBC_1
758:762
PGSST
SPOP
0.9855
More...
Q96BN6
Primary cilium assembly protein FAM149B1
DEG_SPOP_SBC_1
386:390
PGSST
SPOP
0.948
More...
Q86UW9
Probable E3 ubiquitin-protein ligase DTX2
DEG_SPOP_SBC_1
294:298
PGSST
SPOP
0.9802
More...
Q9ULL5
Proline-rich protein 12
DEG_SPOP_SBC_1
137:141
PGSST
SPOP
0.967
More...
Q5T035
Putative uncharacterized protein C9orf129
DEG_SPOP_SBC_1
103:107
PGSST
SPOP
0.9971
More...
Q5VT52
Regulation of nuclear pre-mRNA domain-containing protein 2
DEG_SPOP_SBC_1
759:763
PGSST
SPOP
0.9962
More...
Q8TER5
Rho guanine nucleotide exchange factor 40
DEG_SPOP_SBC_1
1488:1492
PGSST
SPOP
0.9989
More...
O94875
Sorbin and SH3 domain-containing protein 2
DEG_SPOP_SBC_1
285:289
PGSST
SPOP
0.99
More...
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