DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PKSSS
Uniprot ID:
P52594
Source protein:
Arf-GAP domain and FG repeat-containing protein 1
Source gene:
AGFG1
Class:
DEG_SPOP_SBC_1
Location:
289:293
E3 ligase:
SPOP
DEGRON score:
0.9956
ASA_SCORE:
66.82
COIL:
0.8568
CONS_SCORE:
0.3242
DSS_SCORE:
0.3437
HELIX:
0.0844
FCONS_SCORE:
1.0085
RIG_SCORE:
0.6787
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S298I
TCGA-AA-A00N
COAD
TCGA
PKSSS
DEG_SPOP_SBC_1
0.6389
p.A299D
TCGA-EA-A3HU
CESC
TCGA
PKSSS
DEG_SPOP_SBC_1
0.1667
p.A294G
DO219629
BRCA
ICGC
PKSSS
DEG_SPOP_SBC_1
0.3056
p.N287D
DO234443
ESAD
ICGC
PKSSS
DEG_SPOP_SBC_1
0.2778
p.A288S
DO229019
LICA
ICGC
PKSSS
DEG_SPOP_SBC_1
0.3056
p.C280F
DO229015
LICA
ICGC
PKSSS
DEG_SPOP_SBC_1
0.0833
p.Q303H
DO229015
LICA
ICGC
PKSSS
DEG_SPOP_SBC_1
0.0556
p.H284L
DO52318
LIHC
ICGC
PKSSS
DEG_SPOP_SBC_1
0.1944
p.D295N
DO219199
LUSC
ICGC
PKSSS
DEG_SPOP_SBC_1
0.2778
p.N281T
DO46334
OV
ICGC
PKSSS
DEG_SPOP_SBC_1
0.1111
p.A300G
SIDM00845
Burkitt's Lymphoma
GDSC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.A300G
SIDM00035
Thyroid Gland Carcinoma
GDSC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.A300G
SIDM01519
Head and Neck Carcinoma
GDSC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.A300G
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.F282S
SIDM01039
Other Solid Cancers
GDSC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.L291V
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
PKSSS
DEG_SPOP_SBC_1
0.6765
p.L291V
NCI-H2009
lung
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.6765
p.S302P
ACH-000950
Colon/Colorectal Cancer
CCLE
PKSSS
DEG_SPOP_SBC_1
0.5278
p.S302P
LoVo
large_intestine
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.5278
p.N300S
S-117
soft_tissue
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.G300R
COLO-829
skin
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.1389
p.K290E
LNCaP-Clone-FGC
prostate
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.591
Drug responses associated with AGFG1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15085
Rho guanine nucleotide exchange factor 11
DEG_SPOP_SBC_1
543:547
PKSSS
SPOP
0.7465
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1015:1019
PKSSS
SPOP
0.8719
More...
P51825
AF4/FMR2 family member 1
DEG_SPOP_SBC_1
564:568
PKSSS
SPOP
0.9922
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
289:293
PKSSS
SPOP
0.9956
More...
Q15811
Intersectin-1
DEG_SPOP_SBC_1
180:184
PKSSS
SPOP
0.9976
More...
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SPOP_SBC_1
225:229
PKSSS
SPOP
0.9834
More...
Q5TCZ1
SH3 and PX domain-containing protein 2A
DEG_SPOP_SBC_1
663:667
PKSSS
SPOP
0.8452
More...
Q6DN12
Multiple C2 and transmembrane domain-containing protein 2
DEG_SPOP_SBC_1
89:93
PKSSS
SPOP
0.7468
More...
Q7L590
Protein MCM10 homolog
DEG_SPOP_SBC_1
200:204
PKSSS
SPOP
0.9805
More...
Q8N3F8
MICAL-like protein 1
DEG_SPOP_SBC_1
534:538
PKSSS
SPOP
0.9952
More...
Q8WYP5
Protein ELYS
DEG_SPOP_SBC_1
1340:1344
PKSSS
SPOP
0.9617
More...
Q96QS3
Homeobox protein ARX
DEG_SPOP_SBC_1
68:72
PKSSS
SPOP
0.583
More...
Q9NXV6
CDKN2A-interacting protein
DEG_SPOP_SBC_1
347:351
PKSSS
SPOP
0.9905
More...
Q9Y2I7
1-phosphatidylinositol 3-phosphate 5-kinase
DEG_SPOP_SBC_1
1710:1714
PKSSS
SPOP
0.9961
More...
Q9Y5X1
Sorting nexin-9
DEG_SPOP_SBC_1
172:176
PKSSS
SPOP
0.9854
More...
A6NHQ2
rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1
DEG_SPOP_SBC_1
329:333
PKSSS
SPOP
0.72
More...
A7E2F4
Golgin subfamily A member 8A
DEG_SPOP_SBC_1
83:87
PKSSS
SPOP
0.7895
More...
Q5H9T9
Fibrous sheath CABYR-binding protein
DEG_SPOP_SBC_1
20:24
PKSSS
SPOP
0.8424
More...
Q5JSZ5
Protein PRRC2B
DEG_SPOP_SBC_1
96:100
PKSSS
SPOP
0.8516
More...
Q96RV3
Pecanex-like protein 1
DEG_SPOP_SBC_1
544:548
PKSSS
SPOP
0.9953
More...
Q9BX69
Caspase recruitment domain-containing protein 6
DEG_SPOP_SBC_1
1012:1016
PKSSS
SPOP
0.9263
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
434:438
PKSSS
SPOP
0.9775
More...