DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PKSSS
Uniprot ID:
Q9Y5X1
Source protein:
Sorting nexin-9
Source gene:
SNX9
Class:
DEG_SPOP_SBC_1
Location:
172:176
E3 ligase:
SPOP
DEGRON score:
0.9854
ASA_SCORE:
69.46
COIL:
0.856
CONS_SCORE:
0.4145
DSS_SCORE:
0.6211
HELIX:
0.1076
FCONS_SCORE:
0.9227
RIG_SCORE:
0.6544
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D168N
TCGA-AG-A01N
READ
TCGA
PKSSS
DEG_SPOP_SBC_1
0.2222
p.D185A
SIDM00195
Ewing's Sarcoma
GDSC
PKSSS
DEG_SPOP_SBC_1
0.0833
p.D185A
ACH-002117
Bone Cancer
CCLE
PKSSS
DEG_SPOP_SBC_1
0.0833
p.D185A
EW-24
bone
COSMIC
PKSSS
DEG_SPOP_SBC_1
0.0833
Drug responses associated with SNX9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PKSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15085
Rho guanine nucleotide exchange factor 11
DEG_SPOP_SBC_1
543:547
PKSSS
SPOP
0.7465
More...
P49790
Nuclear pore complex protein Nup153
DEG_SPOP_SBC_1
1015:1019
PKSSS
SPOP
0.8719
More...
P51825
AF4/FMR2 family member 1
DEG_SPOP_SBC_1
564:568
PKSSS
SPOP
0.9922
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
289:293
PKSSS
SPOP
0.9956
More...
Q15811
Intersectin-1
DEG_SPOP_SBC_1
180:184
PKSSS
SPOP
0.9976
More...
Q5T200
Zinc finger CCCH domain-containing protein 13
DEG_SPOP_SBC_1
225:229
PKSSS
SPOP
0.9834
More...
Q5TCZ1
SH3 and PX domain-containing protein 2A
DEG_SPOP_SBC_1
663:667
PKSSS
SPOP
0.8452
More...
Q6DN12
Multiple C2 and transmembrane domain-containing protein 2
DEG_SPOP_SBC_1
89:93
PKSSS
SPOP
0.7468
More...
Q7L590
Protein MCM10 homolog
DEG_SPOP_SBC_1
200:204
PKSSS
SPOP
0.9805
More...
Q8N3F8
MICAL-like protein 1
DEG_SPOP_SBC_1
534:538
PKSSS
SPOP
0.9952
More...
Q8WYP5
Protein ELYS
DEG_SPOP_SBC_1
1340:1344
PKSSS
SPOP
0.9617
More...
Q96QS3
Homeobox protein ARX
DEG_SPOP_SBC_1
68:72
PKSSS
SPOP
0.583
More...
Q9NXV6
CDKN2A-interacting protein
DEG_SPOP_SBC_1
347:351
PKSSS
SPOP
0.9905
More...
Q9Y2I7
1-phosphatidylinositol 3-phosphate 5-kinase
DEG_SPOP_SBC_1
1710:1714
PKSSS
SPOP
0.9961
More...
Q9Y5X1
Sorting nexin-9
DEG_SPOP_SBC_1
172:176
PKSSS
SPOP
0.9854
More...
A6NHQ2
rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1
DEG_SPOP_SBC_1
329:333
PKSSS
SPOP
0.72
More...
A7E2F4
Golgin subfamily A member 8A
DEG_SPOP_SBC_1
83:87
PKSSS
SPOP
0.7895
More...
Q5H9T9
Fibrous sheath CABYR-binding protein
DEG_SPOP_SBC_1
20:24
PKSSS
SPOP
0.8424
More...
Q5JSZ5
Protein PRRC2B
DEG_SPOP_SBC_1
96:100
PKSSS
SPOP
0.8516
More...
Q96RV3
Pecanex-like protein 1
DEG_SPOP_SBC_1
544:548
PKSSS
SPOP
0.9953
More...
Q9BX69
Caspase recruitment domain-containing protein 6
DEG_SPOP_SBC_1
1012:1016
PKSSS
SPOP
0.9263
More...
Q5T0Z8
Uncharacterized protein C6orf132
DEG_SPOP_SBC_1
434:438
PKSSS
SPOP
0.9775
More...