DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLSST
Uniprot ID:
Q6P4R8
Source protein:
Nuclear factor related to kappa-B-binding protein
Source gene:
NFRKB
Class:
DEG_SPOP_SBC_1
Location:
336:340
E3 ligase:
SPOP
DEGRON score:
0.984
ASA_SCORE:
76.92
COIL:
0.8632
CONS_SCORE:
0.3545
DSS_SCORE:
0.5018
HELIX:
0.0784
FCONS_SCORE:
0.9515
RIG_SCORE:
0.6494
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I348M
TCGA-A5-A0G2
UCEC
TCGA
PLSST
DEG_SPOP_SBC_1
0.1111
p.T350M
TCGA-AX-A2HC
UCEC
TCGA
PLSST
DEG_SPOP_SBC_1
0.0556
p.L333I
TCGA-B5-A1MX
UCEC
TCGA
PLSST
DEG_SPOP_SBC_1
0.25
p.K338N
TCGA-ER-A19B
SKCM
TCGA
PLSST
DEG_SPOP_SBC_1
0.6918
p.E335K
DO223732
CESC
ICGC
PLSST
DEG_SPOP_SBC_1
0.3056
p.Q348H
DO52456
COCA
ICGC
PLSST
DEG_SPOP_SBC_1
0.1111
p.A330T
DO11854
GBM
ICGC
PLSST
DEG_SPOP_SBC_1
0.1667
p.A344T
DO23468
LINC
ICGC
PLSST
DEG_SPOP_SBC_1
0.2222
p.A344T
DO42280
UCEC
ICGC
PLSST
DEG_SPOP_SBC_1
0.2222
p.E331G
DO48721
LIRI
ICGC
PLSST
DEG_SPOP_SBC_1
0.1944
p.G342K
DO222843
MELA
ICGC
PLSST
DEG_SPOP_SBC_1
0.2778
p.K336N
SIDM00403
T-Lymphoblastic Leukemia
GDSC
PLSST
DEG_SPOP_SBC_1
0.6918
p.K336N
RPMI-8402
haematopoietic_and_lymphoid_tissue
COSMIC
PLSST
DEG_SPOP_SBC_1
0.6918
p.K336R
SIDM01259
B-Lymphoblastic Leukemia
GDSC
PLSST
DEG_SPOP_SBC_1
0.7237
Drug responses associated with NFRKB mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLSST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15550
Lysine-specific demethylase 6A
DEG_SPOP_SBC_1
659:663
PLSST
SPOP
0.9969
More...
O43525
Potassium voltage-gated channel subfamily KQT member 3
DEG_SPOP_SBC_1
852:856
PLSST
SPOP
0.9413
More...
O95487
Protein transport protein Sec24B
DEG_SPOP_SBC_1
371:375
PLSST
SPOP
0.9973
More...
P58107
Epiplakin
DEG_SPOP_SBC_1
797:801
PLSST
SPOP
0.7149
More...
Q13873
Bone morphogenetic protein receptor type-2
DEG_SPOP_SBC_1
698:702
PLSST
SPOP
0.9891
More...
Q13950
Runt-related transcription factor 2
DEG_SPOP_SBC_1
320:324
PLSST
SPOP
0.9988
More...
Q15714
TSC22 domain family protein 1
DEG_SPOP_SBC_1
891:895
PLSST
SPOP
0.9403
More...
Q49AJ0
Protein FAM135B
DEG_SPOP_SBC_1
643:647
PLSST
SPOP
0.9487
More...
Q5M775
Cytospin-B
DEG_SPOP_SBC_1
342:346
PLSST
SPOP
0.9835
More...
Q66GS9
Centrosomal protein of 135 kDa
DEG_SPOP_SBC_1
1123:1127
PLSST
SPOP
0.9913
More...
Q69YN4
Protein virilizer homolog
DEG_SPOP_SBC_1
1757:1761
PLSST
SPOP
0.9993
More...
Q6P4R8
Nuclear factor related to kappa-B-binding protein
DEG_SPOP_SBC_1
336:340
PLSST
SPOP
0.984
More...
Q7Z5J4
Retinoic acid-induced protein 1
DEG_SPOP_SBC_1
1665:1669
PLSST
SPOP
0.9861
More...
Q8IW45
ATP-dependent
DEG_SPOP_SBC_1
63:67
PLSST
SPOP
0.9107
More...
Q8NDV7
Trinucleotide repeat-containing gene 6A protein
DEG_SPOP_SBC_1
1684:1688
PLSST
SPOP
0.9408
More...
Q92546
RAB6A-GEF complex partner protein 2
DEG_SPOP_SBC_1
306:310
PLSST
SPOP
0.6123
More...
Q96N21
AP-4 complex accessory subunit Tepsin
DEG_SPOP_SBC_1
393:397
PLSST
SPOP
0.9714
More...
Q96PX1
E3 ubiquitin ligase RNF157
DEG_SPOP_SBC_1
499:503
PLSST
SPOP
0.976
More...
Q9H7S9
Zinc finger protein 703
DEG_SPOP_SBC_1
71:75
PLSST
SPOP
0.9941
More...
Q9NR46
Endophilin-B2
DEG_SPOP_SBC_1
295:299
PLSST
SPOP
0.6401
More...
Q9P0X4
Voltage-dependent T-type calcium channel subunit alpha-1I
DEG_SPOP_SBC_1
1908:1912
PLSST
SPOP
0.9775
More...
Q9Y2W1
Thyroid hormone receptor-associated protein 3
DEG_SPOP_SBC_1
276:280
PLSST
SPOP
0.9859
More...
Q5VVH5
Interleukin-1 receptor-associated kinase 1-binding protein 1
DEG_SPOP_SBC_1
40:44
PLSST
SPOP
0.9797
More...
Q8WZ64
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
452:456
PLSST
SPOP
0.8986
More...
Q9Y5F7
Protocadherin gamma-C4
DEG_SPOP_SBC_1
544:548
PLSST
SPOP
0.8845
More...