DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
PLTSS
Uniprot ID:
Q6ZMY3
Source protein:
SPOC domain-containing protein 1
Source gene:
SPOCD1
Class:
DEG_SPOP_SBC_1
Location:
193:197
E3 ligase:
SPOP
DEGRON score:
0.8764
ASA_SCORE:
90.32
COIL:
0.9542
CONS_SCORE:
0.4284
DSS_SCORE:
0.6967
HELIX:
0.0186
FCONS_SCORE:
1.0378
RIG_SCORE:
0.5609
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S185N
TCGA-4X-A9FC
THYM
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1111
p.K207N
TCGA-AA-A010
COAD
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1667
p.R192M
TCGA-B5-A3FA
UCEC
TCGA
PLTSS
DEG_SPOP_SBC_1
0.3056
p.R192M
DO52402
UCEC
ICGC
PLTSS
DEG_SPOP_SBC_1
0.3056
p.R204M
TCGA-BR-4370
STAD
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1389
p.R204M
TCGA-BR-7707
STAD
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1389
p.R204M
DO38487
STAD
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1389
p.R204M
DO38499
STAD
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1389
p.P202L
TCGA-E6-A1LX
UCEC
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1944
p.P202L
DO41020
UCEC
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1944
p.E188K
TCGA-EE-A2MS
SKCM
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1944
p.E188K
TCGA-FR-A726
SKCM
TCGA
PLTSS
DEG_SPOP_SBC_1
0.1944
p.E188K
DO37567
SKCM
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1944
p.E188K
DO48665
SKCM
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1944
p.R206I
TCGA-FI-A2D5
UCEC
TCGA
PLTSS
DEG_SPOP_SBC_1
0.0833
p.R206I
DO41331
UCEC
ICGC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.L185M
DO23654
LUAD
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1111
p.P189L
DO231075
LUSC
ICGC
PLTSS
DEG_SPOP_SBC_1
0.2222
p.P202S
DO222753
MELA
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1944
p.M188R
DO28056
OV
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1944
p.K207E
DO28641
OV
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1667
p.R187Q
DO51475
PACA
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1667
p.R200C
DO50284
SKCM
ICGC
PLTSS
DEG_SPOP_SBC_1
0.25
p.D184N
DO47573
SKCM
ICGC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.D184N
DO38123
SKCM
ICGC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.R187W
DO41644
UCEC
ICGC
PLTSS
DEG_SPOP_SBC_1
0.1667
p.L184I
SIDM00232
Kidney Carcinoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.L184I
ACH-002168
Kidney Cancer
CCLE
PLTSS
DEG_SPOP_SBC_1
0.0833
p.L184I
NCC021
kidney
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.P190S
SIDM00617
Hepatocellular Carcinoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.P190S
SIDM00315
Glioblastoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.P190S
SIDM00410
Other Blood Cancers
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.P190S
SIDM01061
Oral Cavity Carcinoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.P190S
SIDM01551
Gastric Carcinoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.P190S
SIDM01776
Plasma Cell Myeloma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.25
p.R206T
SIDM00679
Cervical Carcinoma
GDSC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.R206T
ACH-001525
Cervical Cancer
CCLE
PLTSS
DEG_SPOP_SBC_1
0.0833
p.R206T
HT-3
cervix
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.0833
p.P195L
NCI-H1155
lung
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.7582
p.P207L
NCI-H650
lung
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.1667
p.M191I
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.2778
p.L193P
CCRF-CEM
haematopoietic_and_lymphoid_tissue
COSMIC
PLTSS
DEG_SPOP_SBC_1
0.7582
Drug responses associated with SPOCD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLTSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43586
Proline-serine-threonine phosphatase-interacting protein 1
DEG_SPOP_SBC_1
294:298
PLTSS
SPOP
0.9863
More...
O60284
Suppression of tumorigenicity 18 protein
DEG_SPOP_SBC_1
629:633
PLTSS
SPOP
0.9793
More...
O75563
Src kinase-associated phosphoprotein 2
DEG_SPOP_SBC_1
249:253
PLTSS
SPOP
0.9972
More...
O95486
Protein transport protein Sec24A
DEG_SPOP_SBC_1
226:230
PLTSS
SPOP
0.9934
More...
P15941
Mucin-1
DEG_SPOP_SBC_1
1024:1028
PLTSS
SPOP
0.8767
More...
P49736
DNA replication licensing factor MCM2
DEG_SPOP_SBC_1
23:27
PLTSS
SPOP
0.9038
More...
Q02505
Mucin-3A
DEG_SPOP_SBC_1
1038:1042
PLTSS
SPOP
0.6344
More...
Q15475
Homeobox protein SIX1
DEG_SPOP_SBC_1
274:278
PLTSS
SPOP
0.5507
More...
Q15691
Microtubule-associated protein RP/EB family member 1
DEG_SPOP_SBC_1
152:156
PLTSS
SPOP
0.9872
More...
Q17RY0
Cytoplasmic polyadenylation element-binding protein 4
DEG_SPOP_SBC_1
157:161
PLTSS
SPOP
0.9878
More...
Q5HYW2
NHS-like protein 2
DEG_SPOP_SBC_1
774:778
PLTSS
SPOP
0.9452
More...
Q69YQ0
Cytospin-A
DEG_SPOP_SBC_1
355:359
PLTSS
SPOP
0.9297
More...
Q6ZRS2
Helicase SRCAP
DEG_SPOP_SBC_1
254:258
PLTSS
SPOP
0.949
More...
Q7Z434
Mitochondrial antiviral-signaling protein
DEG_SPOP_SBC_1
189:193
PLTSS
SPOP
0.9989
More...
Q8NEP3
Dynein axonemal assembly factor 1
DEG_SPOP_SBC_1
671:675
PLTSS
SPOP
0.9436
More...
Q8WXI2
Connector enhancer of kinase suppressor of ras 2
DEG_SPOP_SBC_1
775:779
PLTSS
SPOP
0.8711
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
1750:1754
PLTSS
SPOP
0.9632
More...
Q96RU2
Ubiquitin carboxyl-terminal hydrolase 28
DEG_SPOP_SBC_1
514:518
PLTSS
SPOP
0.9579
More...
Q96RW7
Hemicentin-1
DEG_SPOP_SBC_1
2817:2821
PLTSS
SPOP
0.5877
More...
Q99633
Pre-mRNA-splicing factor 18
DEG_SPOP_SBC_1
58:62
PLTSS
SPOP
0.9188
More...
Q9BZE9
Tether containing UBX domain for GLUT4
DEG_SPOP_SBC_1
261:265
PLTSS
SPOP
0.9718
More...
Q9C0B0
RING finger protein unkempt homolog
DEG_SPOP_SBC_1
468:472
PLTSS
SPOP
0.7927
More...
Q9NPI1
Bromodomain-containing protein 7
DEG_SPOP_SBC_1
120:124
PLTSS
SPOP
0.9763
More...
Q9UDV6
Zinc finger protein 212
DEG_SPOP_SBC_1
17:21
PLTSS
SPOP
0.99
More...
Q9UHK0
Nuclear fragile X mental retardation-interacting protein 1
DEG_SPOP_SBC_1
49:53
PLTSS
SPOP
0.9611
More...
Q6ZMY3
SPOC domain-containing protein 1
DEG_SPOP_SBC_1
193:197
PLTSS
SPOP
0.8764
More...
Q8IWR0
Zinc finger CCCH domain-containing protein 7A
DEG_SPOP_SBC_1
347:351
PLTSS
SPOP
0.9188
More...
O94880
PHD finger protein 14
DEG_SPOP_SBC_1
568:572
PLTSS
SPOP
0.9962
More...