DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
VGSSS
Uniprot ID:
Q6IMN6
Source protein:
Caprin-2
Source gene:
CAPRIN2
Class:
DEG_SPOP_SBC_1
Location:
603:607
E3 ligase:
SPOP
DEGRON score:
0.9899
ASA_SCORE:
78.32
COIL:
0.9608
CONS_SCORE:
0.3909
DSS_SCORE:
0.6619
HELIX:
0.018
FCONS_SCORE:
0.9498
RIG_SCORE:
0.5746
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S607F
TCGA-UU-A93S
BRCA
TCGA
VGSSS
DEG_SPOP_SBC_1
0.7982
p.S607F
DO219645
BRCA
ICGC
VGSSS
DEG_SPOP_SBC_1
0.7982
p.S607Y
DO229032
LICA
ICGC
VGSSS
DEG_SPOP_SBC_1
0.712
p.L609V
TCGA-ZN-A9VU
MESO
TCGA
VGSSS
DEG_SPOP_SBC_1
0.2778
p.V599L
TCGA-38-4626
LUAD
TCGA
VGSSS
DEG_SPOP_SBC_1
0.2222
p.V599L
DO24447
LUAD
ICGC
VGSSS
DEG_SPOP_SBC_1
0.2222
p.P598S
TCGA-A5-A0G2
UCEC
TCGA
VGSSS
DEG_SPOP_SBC_1
0.1944
p.P598S
DO41235
UCEC
ICGC
VGSSS
DEG_SPOP_SBC_1
0.1944
p.D594Y
TCGA-D1-A17Q
UCEC
TCGA
VGSSS
DEG_SPOP_SBC_1
0.0833
p.D594Y
DO41903
UCEC
ICGC
VGSSS
DEG_SPOP_SBC_1
0.0833
Showing 1 to 10 of 10 entries
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Drug responses associated with CAPRIN2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of VGSSS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A6NEL2
Ankyrin repeat domain-containing protein SOWAHB
DEG_SPOP_SBC_1
738:742
VGSSS
SPOP
0.9911
More...
P25025
C-X-C chemokine receptor type 2
DEG_SPOP_SBC_1
349:353
VGSSS
SPOP
0.8617
More...
Q5T5Y3
Calmodulin-regulated spectrin-associated protein 1
DEG_SPOP_SBC_1
1208:1212
VGSSS
SPOP
0.9095
More...
Q6IMN6
Caprin-2
DEG_SPOP_SBC_1
603:607
VGSSS
SPOP
0.9899
More...
Q9ULT8
E3 ubiquitin-protein ligase HECTD1
DEG_SPOP_SBC_1
1440:1444
VGSSS
SPOP
0.9873
More...
O94972
E3 ubiquitin-protein ligase TRIM37
DEG_SPOP_SBC_1
591:595
VGSSS
SPOP
0.7449
More...
Q9Y6H8
Gap junction alpha-3 protein
DEG_SPOP_SBC_1
355:359
VGSSS
SPOP
0.9829
More...
Q8N5Q1
Golgi associated RAB2 interactor protein 5B
DEG_SPOP_SBC_1
869:873
VGSSS
SPOP
0.7404
More...
Q9BSE4
Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein
DEG_SPOP_SBC_1
134:138
VGSSS
SPOP
0.9842
More...
Q05469
Hormone-sensitive lipase
DEG_SPOP_SBC_1
238:242
VGSSS
SPOP
0.9766
More...
Q9H792
Inactive tyrosine-protein kinase PEAK1
DEG_SPOP_SBC_1
754:758
VGSSS
SPOP
0.9976
More...
Q14582
Max dimerization protein 4
DEG_SPOP_SBC_1
174:178
VGSSS
SPOP
0.9872
More...
Q8IWI9
MAX gene-associated protein
DEG_SPOP_SBC_1
1871:1875
VGSSS
SPOP
0.9665
More...
Q5VST9
Obscurin
DEG_SPOP_SBC_1
2777:2781
VGSSS
SPOP
0.6097
More...
Q6GQQ9
OTU domain-containing protein 7B
DEG_SPOP_SBC_1
472:476
VGSSS
SPOP
0.9978
More...
Q92576
PHD finger protein 3
DEG_SPOP_SBC_1
1545:1549
VGSSS
SPOP
0.8639
More...
Q99569
Plakophilin-4
DEG_SPOP_SBC_1
333:337
VGSSS
SPOP
0.9838
More...
Q5SXH7
Pleckstrin homology domain-containing family S member 1
DEG_SPOP_SBC_1
166:170
VGSSS
SPOP
0.9981
More...
Q15149
Plectin
DEG_SPOP_SBC_1
4387:4391
VGSSS
SPOP
0.9829
More...
Q92953
Potassium voltage-gated channel subfamily B member 2
DEG_SPOP_SBC_1
851:855
VGSSS
SPOP
0.9618
More...
Q9Y6V0
Protein piccolo
DEG_SPOP_SBC_1
1533:1537
VGSSS
SPOP
0.9666
More...
Q99590
Protein SCAF11
DEG_SPOP_SBC_1
470:474
VGSSS
SPOP
0.9942
More...
Q9H5N1
Rab GTPase-binding effector protein 2
DEG_SPOP_SBC_1
243:247
VGSSS
SPOP
0.9275
More...
Q9UPZ9
Serine/threonine-protein kinase ICK
DEG_SPOP_SBC_1
541:545
VGSSS
SPOP
0.9539
More...
Q9HAK2
Transcription factor COE2
DEG_SPOP_SBC_1
517:521
VGSSS
SPOP
0.9803
More...
Showing 1 to 25 of 28 entries
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