Search results: The pahtway p4554 has 148 genes in the original annotation. Currently, there are 88 genes in SZGR 2.0 (with evidence in schizophrenia) that are present at this pathway.

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Gene ID Symbol Synonyms Official Full Name Location SZ group ? Functional group ?
288ANK3ANKYRIN-G | MRT37ankyrin 3, node of Ranvier (ankyrin G)10q21CV:GWAScat
CV:GWASdb
CV:PGCnp
GO_Annotation
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
23223RRP12KIAA0690ribosomal RNA processing 12 homolog10q24.1CV:GWASdb
CV:PGCnp
Ascano FMRP targets
9221NOLC1NOPP130 | NOPP140 | NS5ATP13 | P130nucleolar and coiled-body phosphoprotein 110q24.32CV:PGCnp
DMG:Jaffe_2016
960CD44CDW44 | CSPG8 | ECMR-III | HCELL | HUTCH-I | IN | LHR | MC56 | MDU2 | MDU3 | MIC4 | Pgp1CD44 molecule (Indian blood group)11p13CV:GWASdb
DMG:Jaffe_2016
DMG:Wockner_2014
Expression
Network
406ARNTLBMAL1 | BMAL1c | JAP3 | MOP3 | PASD3 | TIC | bHLHe5aryl hydrocarbon receptor nuclear translocator like11p15CV:GWAScat
CV:GWASdb
CV:PGCnp
PMID:cooccur
3619INCENP-inner centromere protein11q12.3CV:PGCnp
DMG:Wockner_2014
8061FOSL1FRA | FRA1 | fra-1FOS like antigen 111q13CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
5058PAK1PAKalphap21 protein (Cdc42/Rac)-activated kinase 111q13.5-q14.1CV:PGCnp
GO_Annotation
Network
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
CompositeSet
9416DDX23PRPF28 | SNRNP100 | U5-100K | U5-100KD | prp28DEAD-box helicase 2312q13.12CV:PGCnpAscano FMRP targets
10024TROAPTASTINtrophinin associated protein12q13.12DMG:Jaffe_2016
8914TIMELESSTIM | TIM1 | hTIMtimeless circadian clock12q13.3Association
CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
Ascano FMRP targets
552AVPR1AAVPR V1a | AVPR1 | V1aRarginine vasopressin receptor 1A12q14.2CV:PGCnp
PMID:cooccur
121551BTBD11ABTB2BBTB domain containing 1112q23.3CV:PGCnp
DMG:Wockner_2014
Ascano FMRP targets
10154PLXNC1CD232 | PLXN-C1 | VESPRplexin C112q23.3CV:PGCnp
DMG:Wockner_2014
GO_Annotation
2706GJB2CX26 | DFNA3 | DFNA3A | DFNB1 | DFNB1A | HID | KID | NSRD1 | PPKgap junction protein beta 213q11-q12CV:PGCnp
DMG:Wockner_2014
7011TEP1TLP1 | TP1 | TROVE1 | VAULT2 | p240telomerase associated protein 114q11.2CV:PGCnp
DNM:Xu_2012
GSMA_I
CompositeSet
Chromatin Remodeling Genes
1690COCHCOCH-5B2 | COCH5B2 | DFNA9cochlin14q11.2-q13CV:PGCnp
DEG:Sanders_2013
GSMA_I
23002DAAM1-dishevelled associated activator of morphogenesis 114q23.1Association
CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.humanPSD
G2Cdb.humanPSP
1743DLSTDLTSdihydrolipoamide S-succinyltransferase (E2 component of 2-oxo-glutarate complex)14q24.3CV:PGCnp
DMG:Jaffe_2016
PMID:cooccur
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
G2Cdb.human_clathrin
G2Cdb.human_mitochondria
G2Cdb.human_Synaptosome
G2Cdb.humanPSD
G2Cdb.humanPSP
CompositeSet
55329MNS1SPATA40meiosis specific nuclear structural 115q21.3CV:PGCnp
2521FUSALS6 | ETM4 | FUS1 | HNRNPP2 | POMP75 | TLSFUS RNA binding protein16p11.2CV:PGCnp
DMG:Jaffe_2016
GSMA_IIE
PMID:cooccur
G2Cdb.humanNRC
G2Cdb.humanPSP
Potential synaptic genes
10200MPHOSPH6MPP | MPP-6 | MPP6M-phase phosphoprotein 616q23.3CV:PGCnp
DMG:Jaffe_2016
Network
2175FANCAFA | FA-H | FA1 | FAA | FACA | FAH | FANCHFanconi anemia complementation group A16q24.3CV:PGCnp
6470SHMT1CSHMT | SHMTserine hydroxymethyltransferase 1 (soluble)17p11.2CV:PGCnp
PMID:cooccur
84081NSRP1CCDC55 | HSPC095 | NSrp70nuclear speckle splicing regulatory protein 117q11.2CV:PGCnp
PMID:cooccur
3980LIG3LIG2ligase III, DNA, ATP-dependent17q11.2-q12CV:PGCnpAscano FMRP targets
3487IGFBP4BP-4 | HT29-IGFBP | IBP4 | IGFBP-4insulin like growth factor binding protein 417q21.2CV:PGCnp
PMID:cooccur
78995C17orf53-chromosome 17 open reading frame 5317q21.31CV:PGCnp
DMG:Jaffe_2016
252983STXBP4Synipsyntaxin binding protein 417q22CV:PGCnpEXOCYTOSIS
5055SERPINB2HsT1201 | PAI | PAI-2 | PAI2 | PLANH2serpin peptidase inhibitor, clade B (ovalbumin), member 218q21.3DMG:Wockner_2014
GO_Annotation
23327NEDD4LNEDD4-2 | NEDD4.2 | RSP5 | hNEDD4-2neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase18q21.31CV:PGCnp
DMG:Wockner_2014
PMID:cooccur
G2Cdb.humanPSD
G2Cdb.humanPSP
147372CCBE1HKLLS1collagen and calcium binding EGF domains 118q21.32CV:GWASdb
CV:PGCnp
30000TNPO2IPO3 | KPNB2B | TRN2transportin 219p13.2CV:PGCnp
DMG:vanEijk_2014
CompositeSet
Darnell FMRP targets
50509COL5A3-collagen type V alpha 319p13.2CV:GWASdb
CV:PGCnp
89790SIGLEC10PRO940 | SIGLEC-10 | SLG2sialic acid binding Ig like lectin 1019q13.3CV:PGCnp
DMG:vanEijk_2014
2944GSTM1GST1 | GSTM1-1 | GSTM1a-1a | GSTM1b-1b | GTH4 | GTM1 | H-B | MU | MU-1glutathione S-transferase mu 11p13.3Association
CV:PGCnp
GR_COR
GR_Ng
GR_WM
PMID:cooccur
55635DEPDC1DEP.8 | DEPDC1-V2 | DEPDC1A | SDP35DEP domain containing 11p31.2CV:PGCnp
DMG:Nishioka_2013
Expression
GSMA_IIA
7049TGFBR3BGCAN | betaglycantransforming growth factor beta receptor III1p33-p32CV:PGCnp
DMG:vanEijk_2014
Ascano FMRP targets
2275FHL3SLIM2four and a half LIM domains 31p34CV:PGCnp
DMG:Nishioka_2013
2707GJB3CX31 | DFNA2 | DFNA2B | EKVgap junction protein beta 31p34CV:PGCnp
DMG:Jaffe_2016
54797MED18p28bmediator complex subunit 181p35.3CV:PGCnp
DMG:Jaffe_2016
9557CHD1LALC1 | CHDLchromodomain helicase DNA binding protein 1-like1q12CNV:YES
CV:PGCnp
DMG:Jaffe_2016
GSMA_I
GSMA_IIA
63923TNNTN-Wtenascin N1q23-q24CV:PGCnp
DMG:Wockner_2014
GO_Annotation
PMID:cooccur
23057NMNAT2C1orf15 | PNAT2nicotinamide nucleotide adenylyltransferase 21q25CV:GWASdb
CV:PGCnp
10216PRG4CACP | HAPO | JCAP | MSF | SZPproteoglycan 41q25-q31CV:PGCnp
PMID:cooccur
11221DUSP10MKP-5 | MKP5dual specificity phosphatase 101q41CV:GWASdb
CV:PGCnp
G2Cdb.humanPSD
G2Cdb.humanPSP
2686GGT7D20S101 | GGT4 | GGTL3 | GGTL5 | dJ18C9.2gamma-glutamyltransferase 720q11.22CV:PGCnp
DMG:Wockner_2014
11065UBE2CUBCH10 | dJ447F3.2ubiquitin conjugating enzyme E2 C20q13.12CV:PGCnp
DMG:Wockner_2014
7074TIAM1-T-cell lymphoma invasion and metastasis 121q22.11CV:PGCnp
GO_Annotation
Network
CompositeSet
Darnell FMRP targets
Ascano FMRP targets
Potential synaptic genes
2114ETS2ETS2IT1ETS proto-oncogene 2, transcription factor21q22.2CV:PGCnp
DEG:Zhao_2015
1292COL6A2BTHLM1 | PP3610 | UCMD1collagen type VI alpha 221q22.3CV:PGCnp
DNM:Fromer_2014
CompositeSet
3625INHBB-inhibin beta B2cen-q13CV:PGCnp
DMG:Wockner_2014
GSMA_I
GSMA_IIA
57217TTC7AGIDID | MINAT | TTC7tetratricopeptide repeat domain 7A2p21CV:PGCnp
DMG:Jaffe_2016
79745CLIP4RSNL2CAP-Gly domain containing linker protein family member 42p23.2CV:PGCnp
PMID:cooccur
9173IL1RL1DER4 | FIT-1 | IL33R | ST2 | ST2L | ST2V | T1interleukin 1 receptor like 12q12CV:GWASdb
CV:PGCnp
GSMA_I
7852CXCR4CD184 | D2S201E | FB22 | HM89 | HSY3RR | LAP-3 | LAP3 | LCR1 | LESTR | NPY3R | NPYR | NPYRL | NPYY3R | WHIM | WHIMSC-X-C motif chemokine receptor 42q21CV:GWASdb
CV:PGCnp
GO_Annotation
GSMA_I
GSMA_IIA
PMID:cooccur
3800KIF5CCDCBM2 | KINN | NKHC | NKHC-2 | NKHC2kinesin family member 5C2q23.1CV:GWAScat
CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Wockner_2014
GO_Annotation
GSMA_I
GSMA_IIA
Network
PMID:cooccur
STRUCTURAL PLASTICITY
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-CONSENSUS
G2Cdb.human_BAYES-COLLINS-HUMAN-PSD-FULL
G2Cdb.human_BAYES-COLLINS-MOUSE-PSD-CONSENSUS
CompositeSet
Darnell FMRP targets
Potential synaptic genes
114793FMNL2FHOD2formin like 22q23.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
Expression
GSMA_IIA
CompositeSet
3237HOXD11HOX4 | HOX4Fhomeobox D112q31.1CV:PGCnp
DMG:Jaffe_2016
DMG:Wockner_2014
3239HOXD13BDE | BDSD | HOX4I | SPDhomeobox D132q31.1CV:PGCnp
151195CCNYL1-cyclin Y like 12q33.3CV:PGCnp
GSMA_IIA
GSMA_IIE
56999ADAMTS9-ADAM metallopeptidase with thrombospondin type 1 motif 93p14.1CV:GWASdb
CV:PGCnp
10402ST3GAL6SIAT10 | ST3GALVIST3 beta-galactoside alpha-2,3-sialyltransferase 63q12.1CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
GSMA_IIA
GSMA_IIE
6578SLCO2A1MATR1 | OATP2A1 | PGT | PHOAR2 | SLC21A2solute carrier organic anion transporter family member 2A13q21CV:PGCnp
11343MGLLHU-K5 | HUK5 | MAGL | MGLmonoglyceride lipase3q21.3CV:PGCnp
PMID:cooccur
CANABINOID
CELL METABOLISM
285313IGSF10CMF608immunoglobulin superfamily member 103q25.1CV:GWASdb
CV:PGCnp
5156PDGFRACD140A | GAS9 | PDGFR-2 | PDGFR2 | RHEPDGFRAplatelet derived growth factor receptor alpha4q12CV:GWASdb
CV:PGCnp
CV:PheWAS
DMG:Jaffe_2016
255743NPNTEGFL6L | POEMnephronectin4q24CV:GWASdb
CV:PGCnp
6423SFRP2FRP-2 | SARP1 | SDF-5secreted frizzled-related protein 24q31.3CV:PGCnp
9180OSMROSMRB | PLCA1oncostatin M receptor5p13.1CV:PGCnp
DMG:Nishioka_2013
DMG:Wockner_2014
10468FSTFSfollistatin5q11.2CV:PGCnp
DMG:Nishioka_2013
PMID:cooccur
7060THBS4TSP-4 | TSP4thrombospondin 45q13CV:PGCnp
PMID:cooccur
10085EDIL3DEL1EGF like repeats and discoidin domains 35q14CV:GWASdb
CV:PGCnp
7045TGFBIBIGH3 | CDB1 | CDG2 | CDGG1 | CSD | CSD1 | CSD2 | CSD3 | EBMD | LCD1transforming growth factor beta induced5q31CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
501ALDH7A1ATQ1 | EPD | PDEaldehyde dehydrogenase 7 family member A15q31CV:PGCnp
DMG:Jaffe_2016
GSMA_I
CompositeSet
6949TCOF1MFD1 | TCS | TCS1 | treacletreacle ribosome biogenesis factor 15q32CV:PGCnp
DMG:Jaffe_2016
DMG:Nishioka_2013
GSMA_I
GSMA_IIA
GSMA_IIE
6444SGCD35DAG | CMD1L | DAGD | SG-delta | SGCDP | SGDsarcoglycan delta5q33.3CV:GWASdb
CV:PGCnp
GSMA_I
GSMA_IIA
GSMA_IIE
6941TCF19SC1 | TCF-19transcription factor 196p21.3CV:PGCnp
GSMA_I
2295FOXF2FKHL6 | FREAC-2 | FREAC2forkhead box F26p25.3CV:GWASdb
CV:PGCnp
DMG:Wockner_2014
GSMA_I
PMID:cooccur
3908LAMA2LAMMlaminin subunit alpha 26q22-q23CV:PGCnp
DMG:Wockner_2014
DNM:Gulsuner_2013
DNM:Xu_2012
GO_Annotation
PMID:cooccur
CompositeSet
6446SGK1SGKserum/glucocorticoid regulated kinase 16q23CV:GWAScat
CV:PGCnp
DEG:Sanders_2013
PMID:cooccur
55536CDCA7LJPO2 | R1 | RAM2cell division cycle associated 7 like7p15.3CV:PGCnp
DMG:Wockner_2014
DNM:Fromer_2014
CompositeSet
10875FGL2T49 | pT49fibrinogen like 27q11.23GO_Annotation
54517PUS7-pseudouridylate synthase 7 (putative)7q22.3CV:PGCnp
60561RINT1RINT-1RAD50 interactor 17q22.3CV:PGCnp
7472WNT2INT1L1 | IRPwingless-type MMTV integration site family member 27q31.2CV:PGCnp
PMID:cooccur
11075STMN2SCG10 | SCGN10stathmin 28q21.13CV:GWASdb
CV:PGCnp
GO_Annotation
2356FPGS-folylpolyglutamate synthase9q34.1CV:PGCnp
DMG:Jaffe_2016
GO_Annotation