DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ADSSS
Uniprot ID:
P45973
Source protein:
Chromobox protein homolog 5
Source gene:
CBX5
Class:
DEG_SPOP_SBC_1
Location:
9:13
E3 ligase:
SPOP
DEGRON score:
0.9016
ASA_SCORE:
91.36
COIL:
0.9328
CONS_SCORE:
0.5079
DSS_SCORE:
0.5342
HELIX:
0.0586
FCONS_SCORE:
0.8647
RIG_SCORE:
0.6131
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K3N
TCGA-B5-A3FC
UCEC
TCGA
ADSSS
DEG_SPOP_SBC_1
0.6111
p.K3N
DO41871
UCEC
ICGC
ADSSS
DEG_SPOP_SBC_1
0.6111
p.A9T
DO222762
COCA
ICGC
ADSSS
DEG_SPOP_SBC_1
0.7139
p.T8I
DO233245
GACA
ICGC
ADSSS
DEG_SPOP_SBC_1
0.75
p.K6M
DO228245
LICA
ICGC
ADSSS
DEG_SPOP_SBC_1
0.3611
Drug responses associated with CBX5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0MZ66
Shootin-1
DEG_SPOP_SBC_1
490:494
ADSSS
SPOP
0.992
More...
O14654
Insulin receptor substrate 4
DEG_SPOP_SBC_1
915:919
ADSSS
SPOP
0.9969
More...
O43187
Interleukin-1 receptor-associated kinase-like 2
DEG_SPOP_SBC_1
573:577
ADSSS
SPOP
0.6187
More...
O60242
Adhesion G protein-coupled receptor B3
DEG_SPOP_SBC_1
1171:1175
ADSSS
SPOP
0.8432
More...
O95248
Myotubularin-related protein 5
DEG_SPOP_SBC_1
1235:1239
ADSSS
SPOP
0.5133
More...
P40197
Platelet glycoprotein V
DEG_SPOP_SBC_1
484:488
ADSSS
SPOP
0.6617
More...
P45973
Chromobox protein homolog 5
DEG_SPOP_SBC_1
9:13
ADSSS
SPOP
0.9016
More...
P98153
Integral membrane protein DGCR2/IDD
DEG_SPOP_SBC_1
511:515
ADSSS
SPOP
0.9946
More...
Q03468
DNA excision repair protein ERCC-6
DEG_SPOP_SBC_1
1377:1381
ADSSS
SPOP
0.9914
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
196:200
ADSSS
SPOP
0.9906
More...
Q13480
GRB2-associated-binding protein 1
DEG_SPOP_SBC_1
151:155
ADSSS
SPOP
0.9969
More...
Q14978
Nucleolar and coiled-body phosphoprotein 1
DEG_SPOP_SBC_1
421:425
ADSSS
SPOP
0.9888
More...
Q6ZUT1
Uncharacterized protein NKAPD1
DEG_SPOP_SBC_1
181:185
ADSSS
SPOP
0.9937
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1077:1081
ADSSS
SPOP
0.9779
More...
Q86W24
NACHT, LRR and PYD domains-containing protein 14
DEG_SPOP_SBC_1
2:6
ADSSS
SPOP
0.8095
More...
Q8NA72
Centrosomal protein POC5
DEG_SPOP_SBC_1
127:131
ADSSS
SPOP
0.8228
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
19877:19881
ADSSS
SPOP
0.7426
More...
Q92834
X-linked retinitis pigmentosa GTPase regulator
DEG_SPOP_SBC_1
928:932
ADSSS
SPOP
0.9559
More...
Q969V6
Myocardin-related transcription factor A
DEG_SPOP_SBC_1
110:114
ADSSS
SPOP
0.9951
More...
Q99941
Cyclic AMP-dependent transcription factor ATF-6 beta
DEG_SPOP_SBC_1
183:187
ADSSS
SPOP
0.9951
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
600:604
ADSSS
SPOP
0.9818
More...
Q9NP73
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
DEG_SPOP_SBC_1
1055:1059
ADSSS
SPOP
0.9769
More...
Q9UKV3
Apoptotic chromatin condensation inducer in the nucleus
DEG_SPOP_SBC_1
574:578
ADSSS
SPOP
0.9639
More...
Q9UL68
Myelin transcription factor 1-like protein
DEG_SPOP_SBC_1
82:86
ADSSS
SPOP
0.9679
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
929:933
ADSSS
SPOP
0.6557
More...
O15069
NAC-alpha domain-containing protein 1
DEG_SPOP_SBC_1
282:286
ADSSS
SPOP
0.9969
More...
Q66K14
TBC1 domain family member 9B
DEG_SPOP_SBC_1
355:359
ADSSS
SPOP
0.7361
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
494:498
ADSSS
SPOP
0.9841
More...