DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ADSSS
Uniprot ID:
Q14978
Source protein:
Nucleolar and coiled-body phosphoprotein 1
Source gene:
NOLC1
Class:
DEG_SPOP_SBC_1
Location:
421:425
E3 ligase:
SPOP
DEGRON score:
0.9888
ASA_SCORE:
87.14
COIL:
0.9366
CONS_SCORE:
0.5465
DSS_SCORE:
0.6852
HELIX:
0.0486
FCONS_SCORE:
1.1043
RIG_SCORE:
0.5771
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S433R
TCGA-24-2254
OV
TCGA
ADSSS
DEG_SPOP_SBC_1
0.1111
p.T418M
TCGA-AA-3672
COAD
TCGA
ADSSS
DEG_SPOP_SBC_1
0.25
p.T418M
TCGA-AA-A01R
COAD
TCGA
ADSSS
DEG_SPOP_SBC_1
0.25
p.G412S
TCGA-VQ-A91D
STAD
TCGA
ADSSS
DEG_SPOP_SBC_1
0.0833
p.T419M
DO9010
COAD
ICGC
ADSSS
DEG_SPOP_SBC_1
0.2778
p.T419M
DO7934
COAD
ICGC
ADSSS
DEG_SPOP_SBC_1
0.2778
p.A422S
DO229035
LICA
ICGC
ADSSS
DEG_SPOP_SBC_1
0.7588
p.S434R
DO29156
OV
ICGC
ADSSS
DEG_SPOP_SBC_1
0.0833
p.G413S
DO51783
STAD
ICGC
ADSSS
DEG_SPOP_SBC_1
0.1111
p.L427M
SIDM00153
T-Lymphoblastic Leukemia
GDSC
ADSSS
DEG_SPOP_SBC_1
0.2778
p.A413V
SIDM01729
Endometrial Carcinoma
GDSC
ADSSS
DEG_SPOP_SBC_1
0.1111
p.S430N
ACH-000692
Head and Neck Cancer
CCLE
ADSSS
DEG_SPOP_SBC_1
0.1944
p.L417M
ACH-000964
Leukemia
CCLE
ADSSS
DEG_SPOP_SBC_1
0.2222
Drug responses associated with NOLC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ADSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A0MZ66
Shootin-1
DEG_SPOP_SBC_1
490:494
ADSSS
SPOP
0.992
More...
O14654
Insulin receptor substrate 4
DEG_SPOP_SBC_1
915:919
ADSSS
SPOP
0.9969
More...
O43187
Interleukin-1 receptor-associated kinase-like 2
DEG_SPOP_SBC_1
573:577
ADSSS
SPOP
0.6187
More...
O60242
Adhesion G protein-coupled receptor B3
DEG_SPOP_SBC_1
1171:1175
ADSSS
SPOP
0.8432
More...
O95248
Myotubularin-related protein 5
DEG_SPOP_SBC_1
1235:1239
ADSSS
SPOP
0.5133
More...
P40197
Platelet glycoprotein V
DEG_SPOP_SBC_1
484:488
ADSSS
SPOP
0.6617
More...
P45973
Chromobox protein homolog 5
DEG_SPOP_SBC_1
9:13
ADSSS
SPOP
0.9016
More...
P98153
Integral membrane protein DGCR2/IDD
DEG_SPOP_SBC_1
511:515
ADSSS
SPOP
0.9946
More...
Q03468
DNA excision repair protein ERCC-6
DEG_SPOP_SBC_1
1377:1381
ADSSS
SPOP
0.9914
More...
Q13428
Treacle protein
DEG_SPOP_SBC_1
196:200
ADSSS
SPOP
0.9906
More...
Q13480
GRB2-associated-binding protein 1
DEG_SPOP_SBC_1
151:155
ADSSS
SPOP
0.9969
More...
Q14978
Nucleolar and coiled-body phosphoprotein 1
DEG_SPOP_SBC_1
421:425
ADSSS
SPOP
0.9888
More...
Q6ZUT1
Uncharacterized protein NKAPD1
DEG_SPOP_SBC_1
181:185
ADSSS
SPOP
0.9937
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1077:1081
ADSSS
SPOP
0.9779
More...
Q86W24
NACHT, LRR and PYD domains-containing protein 14
DEG_SPOP_SBC_1
2:6
ADSSS
SPOP
0.8095
More...
Q8NA72
Centrosomal protein POC5
DEG_SPOP_SBC_1
127:131
ADSSS
SPOP
0.8228
More...
Q8WZ42
Titin
DEG_SPOP_SBC_1
19877:19881
ADSSS
SPOP
0.7426
More...
Q92834
X-linked retinitis pigmentosa GTPase regulator
DEG_SPOP_SBC_1
928:932
ADSSS
SPOP
0.9559
More...
Q969V6
Myocardin-related transcription factor A
DEG_SPOP_SBC_1
110:114
ADSSS
SPOP
0.9951
More...
Q99941
Cyclic AMP-dependent transcription factor ATF-6 beta
DEG_SPOP_SBC_1
183:187
ADSSS
SPOP
0.9951
More...
Q9HCJ0
Trinucleotide repeat-containing gene 6C protein
DEG_SPOP_SBC_1
600:604
ADSSS
SPOP
0.9818
More...
Q9NP73
Putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
DEG_SPOP_SBC_1
1055:1059
ADSSS
SPOP
0.9769
More...
Q9UKV3
Apoptotic chromatin condensation inducer in the nucleus
DEG_SPOP_SBC_1
574:578
ADSSS
SPOP
0.9639
More...
Q9UL68
Myelin transcription factor 1-like protein
DEG_SPOP_SBC_1
82:86
ADSSS
SPOP
0.9679
More...
Q9ULT6
E3 ubiquitin-protein ligase ZNRF3
DEG_SPOP_SBC_1
929:933
ADSSS
SPOP
0.6557
More...
O15069
NAC-alpha domain-containing protein 1
DEG_SPOP_SBC_1
282:286
ADSSS
SPOP
0.9969
More...
Q66K14
TBC1 domain family member 9B
DEG_SPOP_SBC_1
355:359
ADSSS
SPOP
0.7361
More...
Q9ULL0
Acrosomal protein KIAA1210
DEG_SPOP_SBC_1
494:498
ADSSS
SPOP
0.9841
More...