DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
ASSTS
Uniprot ID:
Q9NZP6
Source protein:
Nuclear pore-associated protein 1
Source gene:
NPAP1
Class:
DEG_SPOP_SBC_1
Location:
185:189
E3 ligase:
SPOP
DEGRON score:
0.97
ASA_SCORE:
64.58
COIL:
0.852
CONS_SCORE:
0.6397
DSS_SCORE:
0.749
HELIX:
0.0684
FCONS_SCORE:
1.0683
RIG_SCORE:
0.5627
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V198L
TCGA-05-4417
LUAD
TCGA
ASSTS
DEG_SPOP_SBC_1
0.0833
p.V198L
DO23570
LUAD
ICGC
ASSTS
DEG_SPOP_SBC_1
0.0833
p.D197Y
TCGA-17-Z031
LUAD
TCGA
ASSTS
DEG_SPOP_SBC_1
0.1111
p.G183V
TCGA-21-5786
LUSC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183V
DO26830
LUSC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G193V
TCGA-55-7994
LUAD
TCGA
ASSTS
DEG_SPOP_SBC_1
0.2222
p.G193V
DO45311
LUAD
ICGC
ASSTS
DEG_SPOP_SBC_1
0.2222
p.L180H
TCGA-66-2759
LUSC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.1944
p.L180H
TCGA-VQ-A8PH
STAD
TCGA
ASSTS
DEG_SPOP_SBC_1
0.1944
p.L180H
DO27326
LUSC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.1944
p.L180H
DO222349
STAD
ICGC
ASSTS
DEG_SPOP_SBC_1
0.1944
p.S182R
TCGA-92-7340
LUSC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.25
p.S182R
DO26775
LUSC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.25
p.G183R
TCGA-98-A53A
LUSC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183R
TCGA-CS-5395
LGG
TCGA
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183R
DO22356
LGG
ICGC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183R
DO219178
LUSC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183R
SIDM00879
Breast Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.G183R
SIDM01686
Chronic Myelogenous Leukemia
GDSC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.E175K
TCGA-A5-A2K5
UCEC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.0556
p.E175K
DO41379
UCEC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.0556
p.S191A
TCGA-D5-6924
COAD
TCGA
ASSTS
DEG_SPOP_SBC_1
0.2778
p.S191A
DO7922
COAD
ICGC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.L180P
TCGA-DD-A3A9
LIHC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.1944
p.L180P
DO44888
LIHC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.1944
p.S186L
TCGA-EO-A3AY
UCEC
TCGA
ASSTS
DEG_SPOP_SBC_1
0.6556
p.S186L
TCGA-F5-6863
READ
TCGA
ASSTS
DEG_SPOP_SBC_1
0.6556
p.S186L
DO37042
READ
ICGC
ASSTS
DEG_SPOP_SBC_1
0.6556
p.S186L
DO43202
UCEC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.6556
p.A199S
DO223069
ESCA
ICGC
ASSTS
DEG_SPOP_SBC_1
0.0556
p.S182G
DO231007
LUSC
ICGC
ASSTS
DEG_SPOP_SBC_1
0.25
p.K176N
DO229083
PRAD
ICGC
ASSTS
DEG_SPOP_SBC_1
0.1944
p.V198M
SIDM01300
Colorectal Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.0833
p.S181C
SIDM00541
Colorectal Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.2222
p.S181C
ACH-000926
Colon/Colorectal Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.2222
p.S181C
HT55
large_intestine
COSMIC
ASSTS
DEG_SPOP_SBC_1
0.2222
p.R177K
SIDM00545
Melanoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177K
ACH-000987
Skin Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177K
Mewo
skin
COSMIC
ASSTS
DEG_SPOP_SBC_1
0.1111
p.S191T
SIDM00545
Melanoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.S191T
ACH-000987
Skin Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.2778
p.S191T
Mewo
skin
COSMIC
ASSTS
DEG_SPOP_SBC_1
0.2778
p.E175D
SIDM00967
Ovarian Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.0556
p.E175D
ACH-002181
Ovarian Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.0556
p.E175D
OVCA420
ovary
COSMIC
ASSTS
DEG_SPOP_SBC_1
0.0556
p.R177S
SIDM00709
Non-Small Cell Lung Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177S
SIDM01387
Small Cell Lung Carcinoma
GDSC
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177S
ACH-000451
Lung Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177S
ACH-000921
Lung Cancer
CCLE
ASSTS
DEG_SPOP_SBC_1
0.1111
p.R177S
NCI-H2085
lung
COSMIC
ASSTS
DEG_SPOP_SBC_1
0.1111
Drug responses associated with NPAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ASSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7KAX9
Rho GTPase-activating protein 32
DEG_SPOP_SBC_1
1446:1450
ASSTS
SPOP
0.9991
More...
O75928
E3 SUMO-protein ligase PIAS2
DEG_SPOP_SBC_1
578:582
ASSTS
SPOP
0.9737
More...
O94851
[F-actin]-monooxygenase MICAL2
DEG_SPOP_SBC_1
1755:1759
ASSTS
SPOP
0.6619
More...
P10070
Zinc finger protein GLI2
DEG_SPOP_SBC_1
630:634
ASSTS
SPOP
0.9397
More...
P22736
Nuclear receptor subfamily 4 group A member 1
DEG_SPOP_SBC_1
85:89
ASSTS
SPOP
0.9434
More...
P35658
Nuclear pore complex protein Nup214
DEG_SPOP_SBC_1
1352:1356
ASSTS
SPOP
0.9983
More...
P52594
Arf-GAP domain and FG repeat-containing protein 1
DEG_SPOP_SBC_1
148:152
ASSTS
SPOP
0.9958
More...
P58753
Toll/interleukin-1 receptor domain-containing adapter protein
DEG_SPOP_SBC_1
2:6
ASSTS
SPOP
0.9282
More...
Q04724
Transducin-like enhancer protein 1
DEG_SPOP_SBC_1
294:298
ASSTS
SPOP
0.9961
More...
Q14689
Disco-interacting protein 2 homolog A
DEG_SPOP_SBC_1
180:184
ASSTS
SPOP
0.9864
More...
Q5T5U3
Rho GTPase-activating protein 21
DEG_SPOP_SBC_1
791:795
ASSTS
SPOP
0.9947
More...
Q6UB99
Ankyrin repeat domain-containing protein 11
DEG_SPOP_SBC_1
520:524
ASSTS
SPOP
0.8668
More...
Q6ZUJ8
Phosphoinositide 3-kinase adapter protein 1
DEG_SPOP_SBC_1
723:727
ASSTS
SPOP
0.9991
More...
Q70CQ4
Ubiquitin carboxyl-terminal hydrolase 31
DEG_SPOP_SBC_1
1125:1129
ASSTS
SPOP
0.9989
More...
Q7Z460
CLIP-associating protein 1
DEG_SPOP_SBC_1
255:259
ASSTS
SPOP
0.9466
More...
Q7Z5P9
Mucin-19
DEG_SPOP_SBC_1
6830:6834
ASSTS
SPOP
0.963
More...
Q8IZR5
CKLF-like MARVEL transmembrane domain-containing protein 4
DEG_SPOP_SBC_1
14:18
ASSTS
SPOP
0.9523
More...
Q8N307
Mucin-20
DEG_SPOP_SBC_1
452:456
ASSTS
SPOP
0.9768
More...
Q8N8S7
Protein enabled homolog
DEG_SPOP_SBC_1
484:488
ASSTS
SPOP
0.9828
More...
Q8TB72
Pumilio homolog 2
DEG_SPOP_SBC_1
676:680
ASSTS
SPOP
0.9986
More...
Q96JM7
Lethal
DEG_SPOP_SBC_1
5:9
ASSTS
SPOP
0.9955
More...
Q9H2X6
Homeodomain-interacting protein kinase 2
DEG_SPOP_SBC_1
98:102
ASSTS
SPOP
0.9954
More...
Q9NZP6
Nuclear pore-associated protein 1
DEG_SPOP_SBC_1
185:189
ASSTS
SPOP
0.97
More...
Q9UH73
Transcription factor COE1
DEG_SPOP_SBC_1
525:529
ASSTS
SPOP
0.908
More...
Q9Y2I7
1-phosphatidylinositol 3-phosphate 5-kinase
DEG_SPOP_SBC_1
1176:1180
ASSTS
SPOP
0.9955
More...
Q9ULK2
Ataxin-7-like protein 1
DEG_SPOP_SBC_1
158:162
ASSTS
SPOP
0.9526
More...
Q9ULK2
Ataxin-7-like protein 1
DEG_SPOP_SBC_1
227:231
ASSTS
SPOP
0.9062
More...
Q5RHP9
Glutamate-rich protein 3
DEG_SPOP_SBC_1
580:584
ASSTS
SPOP
0.9566
More...
Q99457
Nucleosome assembly protein 1-like 3
DEG_SPOP_SBC_1
23:27
ASSTS
SPOP
0.5181
More...
Q92628
Uncharacterized protein KIAA0232
DEG_SPOP_SBC_1
1366:1370
ASSTS
SPOP
0.9835
More...