DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PATST
Uniprot ID:
O43561
Source protein:
Linker for activation of T-cells family member 1
Source gene:
LAT
Class:
DEG_SPOP_SBC_1
Location:
170:174
E3 ligase:
SPOP
DEGRON score:
0.9982
ASA_SCORE:
78.94
COIL:
0.8734
CONS_SCORE:
0.521
DSS_SCORE:
0.5213
HELIX:
0.0736
FCONS_SCORE:
0.7063
RIG_SCORE:
0.6463
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A170T
DO42713
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.7139
p.P173T
ACH-001408
Bladder Cancer
CCLE
PATST
DEG_SPOP_SBC_1
0.7031
p.V170L
TCGA-DF-A2KU
UCEC
TCGA
PATST
DEG_SPOP_SBC_1
0.6765
p.A183V
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.5278
p.L184R
HEC-1
endometrium
COSMIC
PATST
DEG_SPOP_SBC_1
0.5
p.A176S
DO229041
LICA
ICGC
PATST
DEG_SPOP_SBC_1
0.2778
p.A178T
TCGA-EO-A22R
UCEC
TCGA
PATST
DEG_SPOP_SBC_1
0.2222
p.E178K
CRO-AP3
NS
COSMIC
PATST
DEG_SPOP_SBC_1
0.2222
p.P165R
DO233262
GACA
ICGC
PATST
DEG_SPOP_SBC_1
0.1944
p.E179K
CRO-AP3
NS
COSMIC
PATST
DEG_SPOP_SBC_1
0.1944
p.A180V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.1667
p.A181V
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.1389
p.A182V
HD-MY-Z
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.1111
Showing 1 to 13 of 13 entries
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Drug responses associated with LAT mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PATST
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
Showing 1 to 20 of 20 entries
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