DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PATST
Uniprot ID:
P20719
Source protein:
Homeobox protein Hox-A5
Source gene:
HOXA5
Class:
DEG_SPOP_SBC_1
Location:
89:93
E3 ligase:
SPOP
DEGRON score:
0.973
ASA_SCORE:
62.68
COIL:
0.9244
CONS_SCORE:
0.5364
DSS_SCORE:
0.7759
HELIX:
0.034
FCONS_SCORE:
0.8595
RIG_SCORE:
0.5313
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T93M
TCGA-B7-A5TI
STAD
TCGA
PATST
DEG_SPOP_SBC_1
0.7423
p.T93M
DO222328
STAD
ICGC
PATST
DEG_SPOP_SBC_1
0.7423
p.T91M
DO227802
COCA
ICGC
PATST
DEG_SPOP_SBC_1
0.7423
p.T91M
DO228581
GACA
ICGC
PATST
DEG_SPOP_SBC_1
0.7423
p.P102L
DO228637
PRAD
ICGC
PATST
DEG_SPOP_SBC_1
0.0833
p.R85K
SIDM00296
Small Cell Lung Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.2222
Drug responses associated with HOXA5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...