DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PATST
Uniprot ID:
P15884
Source protein:
Transcription factor 4
Source gene:
TCF4
Class:
DEG_SPOP_SBC_1
Location:
206:210
E3 ligase:
SPOP
DEGRON score:
0.9056
ASA_SCORE:
58.48
COIL:
0.8472
CONS_SCORE:
0.3285
DSS_SCORE:
0.5106
HELIX:
0.053
FCONS_SCORE:
0.9318
RIG_SCORE:
0.6302
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S210L
TCGA-DA-A1HV
SKCM
TCGA
PATST
DEG_SPOP_SBC_1
0.7667
p.G209S
TCGA-EE-A2MU
SKCM
TCGA
PATST
DEG_SPOP_SBC_1
0.6993
p.S200F
TCGA-FS-A1Z0
SKCM
TCGA
PATST
DEG_SPOP_SBC_1
0.1667
p.M217I
DO8360
COAD
ICGC
PATST
DEG_SPOP_SBC_1
0.1389
p.T210N
DO229006
LICA
ICGC
PATST
DEG_SPOP_SBC_1
0.7055
p.P202S
DO220891
MELA
ICGC
PATST
DEG_SPOP_SBC_1
0.2222
p.P202S
COLO-741
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.2222
p.D197G
DO228138
PBCA
ICGC
PATST
DEG_SPOP_SBC_1
0.0833
p.G220S
DO37406
SKCM
ICGC
PATST
DEG_SPOP_SBC_1
0.0556
p.S203F
DO50297
SKCM
ICGC
PATST
DEG_SPOP_SBC_1
0.25
p.P199T
DO43154
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.1389
p.S198L
DO52426
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.1111
p.L220F
SIDM01519
Head and Neck Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.L220V
SIDM01519
Head and Neck Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.G218V
NCI-SNU-1
stomach
COSMIC
PATST
DEG_SPOP_SBC_1
0.1111
p.T213K
L-540
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.25
p.P202L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.2222
p.G198R
NCI-H661
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.1111
p.P219L
SNU-1040
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.0833
p.S210N
SNG-M
endometrium
COSMIC
PATST
DEG_SPOP_SBC_1
0.7069
p.H197Q
huH-1
liver
COSMIC
PATST
DEG_SPOP_SBC_1
0.0833
p.H210Q
RKO
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.7582
p.P200S
COLO-741
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.1667
p.P208A
NCI-H1869
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.7503
p.N211I
NCI-H211
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.3056
p.H220Q
huH-1
liver
COSMIC
PATST
DEG_SPOP_SBC_1
0.0556
p.P208L
SNU-1040
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.7582
p.S207N
TE-10
oesophagus
COSMIC
PATST
DEG_SPOP_SBC_1
0.7069
p.H198Q
huH-1
liver
COSMIC
PATST
DEG_SPOP_SBC_1
0.1111
p.P201L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.1944
p.P219A
NCI-H1869
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.0833
p.P208S
COLO-741
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.6752
p.S209T
IST-MEL1
skin
COSMIC
PATST
DEG_SPOP_SBC_1
0.6005
p.S206N
TE-10
oesophagus
COSMIC
PATST
DEG_SPOP_SBC_1
0.7069
Drug responses associated with TCF4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...