DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
PATST
Uniprot ID:
P52948
Source protein:
Nuclear pore complex protein Nup98-Nup96
Source gene:
NUP98
Class:
DEG_SPOP_SBC_1
Location:
71:75
E3 ligase:
SPOP
DEGRON score:
0.9475
ASA_SCORE:
65.56
COIL:
0.8704
CONS_SCORE:
0.3682
DSS_SCORE:
0.4314
HELIX:
0.0242
FCONS_SCORE:
0.861
RIG_SCORE:
0.6854
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T75S
DO229018
LICA
ICGC
PATST
DEG_SPOP_SBC_1
0.6005
p.S67L
DO229446
SKCA
ICGC
PATST
DEG_SPOP_SBC_1
0.2222
p.T85A
SIDM00454
Rhabdomyosarcoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.T85A
SIDM01117
Small Cell Lung Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.T85A
SIDM00087
Plasma Cell Myeloma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.T85A
SIDM00210
Ovarian Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.T85A
SIDM00721
Small Cell Lung Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.T85A
SIDM00628
Breast Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.S76G
SIDM00473
Oral Cavity Carcinoma
GDSC
PATST
DEG_SPOP_SBC_1
0.3056
p.S76G
ACH-000619
Head and Neck Cancer
CCLE
PATST
DEG_SPOP_SBC_1
0.3056
p.S76G
PE/CA-PJ15
upper_aerodigestive_tract
COSMIC
PATST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with NUP98 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...