DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PATST
Uniprot ID:
Q04637
Source protein:
Eukaryotic translation initiation factor 4 gamma 1
Source gene:
EIF4G1
Class:
DEG_SPOP_SBC_1
Location:
1115:1119
E3 ligase:
SPOP
DEGRON score:
0.9995
ASA_SCORE:
76.74
COIL:
0.8592
CONS_SCORE:
0.336
DSS_SCORE:
0.5545
HELIX:
0.1134
FCONS_SCORE:
1.0028
RIG_SCORE:
0.6868
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1109R
TCGA-AB-2833
LAML
TCGA
PATST
DEG_SPOP_SBC_1
0.1667
p.R1129H
TCGA-AX-A2HD
UCEC
TCGA
PATST
DEG_SPOP_SBC_1
0.0556
p.R1129H
SIDM01259
B-Lymphoblastic Leukemia
GDSC
PATST
DEG_SPOP_SBC_1
0.0556
p.P1112H
TCGA-BR-8361
STAD
TCGA
PATST
DEG_SPOP_SBC_1
0.25
p.A1115T
TCGA-UF-A7JS
HNSC
TCGA
PATST
DEG_SPOP_SBC_1
0.7139
p.G1112D
DO575
BLCA
ICGC
PATST
DEG_SPOP_SBC_1
0.25
p.R1109Q
DO52495
COCA
ICGC
PATST
DEG_SPOP_SBC_1
0.1667
p.G1128R
DO234401
ESAD
ICGC
PATST
DEG_SPOP_SBC_1
0.0833
p.R1127L
DO229029
LICA
ICGC
PATST
DEG_SPOP_SBC_1
0.1111
p.R1121P
DO49876
LUAD
ICGC
PATST
DEG_SPOP_SBC_1
0.2778
p.R1121S
DO28923
OV
ICGC
PATST
DEG_SPOP_SBC_1
0.2778
p.A1115D
DO229275
THCA
ICGC
PATST
DEG_SPOP_SBC_1
0.7793
p.R1127Q
DO42280
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.1111
p.E1113K
DO43186
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.2778
p.E1113K
DO42608
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.2778
p.D1117N
DO41331
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.6932
p.D1117N
NCI-H838
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.6932
p.R1121H
SIDM00844
Burkitt's Lymphoma
GDSC
PATST
DEG_SPOP_SBC_1
0.2778
p.R1110Q
ACH-000641
Leukemia
CCLE
PATST
DEG_SPOP_SBC_1
0.6389
p.R1110Q
ACH-001036
Leukemia
CCLE
PATST
DEG_SPOP_SBC_1
0.6389
p.R1110Q
CMK
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.6389
p.T1124M
ACH-000961
Endometrial/Uterine Cancer
CCLE
PATST
DEG_SPOP_SBC_1
0.1944
p.L1111H
LCLC-97TM1
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.2222
p.D1116N
NCI-H838
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.6932
p.R1118Q
TK10
kidney
COSMIC
PATST
DEG_SPOP_SBC_1
0.7329
p.R1118H
SNU-1040
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.8244
p.S1121F
SNU-175
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.2778
p.L1112H
LCLC-97TM1
lung
COSMIC
PATST
DEG_SPOP_SBC_1
0.25
p.R1119H
SNU-1040
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.8244
p.S1122F
SNU-175
large_intestine
COSMIC
PATST
DEG_SPOP_SBC_1
0.25
p.R1111Q
CMK
haematopoietic_and_lymphoid_tissue
COSMIC
PATST
DEG_SPOP_SBC_1
0.2222
p.R1117Q
TK10
kidney
COSMIC
PATST
DEG_SPOP_SBC_1
0.7329
Drug responses associated with EIF4G1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...