DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
PATST
Uniprot ID:
Q7Z6B7
Source protein:
SLIT-ROBO Rho GTPase-activating protein 1
Source gene:
SRGAP1
Class:
DEG_SPOP_SBC_1
Location:
1002:1006
E3 ligase:
SPOP
DEGRON score:
0.9965
ASA_SCORE:
83.6
COIL:
0.9238
CONS_SCORE:
0.31
DSS_SCORE:
0.6401
HELIX:
0.0436
FCONS_SCORE:
0.9726
RIG_SCORE:
0.6308
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1016S
TCGA-55-A4DF
LUAD
TCGA
PATST
DEG_SPOP_SBC_1
0.0556
p.A1016S
DO45318
LUAD
ICGC
PATST
DEG_SPOP_SBC_1
0.0556
p.T1006M
TCGA-67-3771
LUAD
TCGA
PATST
DEG_SPOP_SBC_1
0.8534
p.E994D
TCGA-77-8143
LUSC
TCGA
PATST
DEG_SPOP_SBC_1
0.1111
p.S999Y
TCGA-A5-A0G2
UCEC
TCGA
PATST
DEG_SPOP_SBC_1
0.6944
p.S999Y
DO41235
UCEC
ICGC
PATST
DEG_SPOP_SBC_1
0.6944
p.P1002T
TCGA-A6-6781
COAD
TCGA
PATST
DEG_SPOP_SBC_1
0.7031
p.S1008F
TCGA-AX-A05Z
UCEC
TCGA
PATST
DEG_SPOP_SBC_1
0.7222
p.P1011H
TCGA-D9-A149
SKCM
TCGA
PATST
DEG_SPOP_SBC_1
0.1944
p.G1007V
DO51878
BLCA
ICGC
PATST
DEG_SPOP_SBC_1
0.3056
p.N998K
DO233734
GACA
ICGC
PATST
DEG_SPOP_SBC_1
0.2222
p.N1003D
DO233820
GACA
ICGC
PATST
DEG_SPOP_SBC_1
0.6932
p.N1003H
DO220359
KICH
ICGC
PATST
DEG_SPOP_SBC_1
0.7423
p.P1010S
DO46779
PAEN
ICGC
PATST
DEG_SPOP_SBC_1
0.6667
p.G1007A
DoTc2-4510
cervix
COSMIC
PATST
DEG_SPOP_SBC_1
0.3056
Drug responses associated with SRGAP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PATST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43561
Linker for activation of T-cells family member 1
DEG_SPOP_SBC_1
170:174
PATST
SPOP
0.9982
More...
P15336
Cyclic AMP-dependent transcription factor ATF-2
DEG_SPOP_SBC_1
318:322
PATST
SPOP
0.9918
More...
P15884
Transcription factor 4
DEG_SPOP_SBC_1
206:210
PATST
SPOP
0.9056
More...
P20719
Homeobox protein Hox-A5
DEG_SPOP_SBC_1
89:93
PATST
SPOP
0.973
More...
P37198
Nuclear pore glycoprotein p62
DEG_SPOP_SBC_1
50:54
PATST
SPOP
0.9962
More...
P38935
DNA-binding protein SMUBP-2
DEG_SPOP_SBC_1
669:673
PATST
SPOP
0.9876
More...
P52948
Nuclear pore complex protein Nup98-Nup96
DEG_SPOP_SBC_1
71:75
PATST
SPOP
0.9475
More...
Q04637
Eukaryotic translation initiation factor 4 gamma 1
DEG_SPOP_SBC_1
1115:1119
PATST
SPOP
0.9995
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
DEG_SPOP_SBC_1
575:579
PATST
SPOP
0.999
More...
Q7Z6B7
SLIT-ROBO Rho GTPase-activating protein 1
DEG_SPOP_SBC_1
1002:1006
PATST
SPOP
0.9965
More...
Q86UE4
Protein LYRIC
DEG_SPOP_SBC_1
514:518
PATST
SPOP
0.987
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
4466:4470
PATST
SPOP
0.9678
More...
Q8WXI7
Mucin-16
DEG_SPOP_SBC_1
12043:12047
PATST
SPOP
0.7282
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
860:864
PATST
SPOP
0.9349
More...
Q96Q05
Trafficking protein particle complex subunit 9
DEG_SPOP_SBC_1
897:901
PATST
SPOP
0.7829
More...
Q9ULI3
Protein HEG homolog 1
DEG_SPOP_SBC_1
829:833
PATST
SPOP
0.9954
More...
Q9Y3S1
Serine/threonine-protein kinase WNK2
DEG_SPOP_SBC_1
1438:1442
PATST
SPOP
0.9888
More...
Q9C0D7
Probable ribonuclease ZC3H12C
DEG_SPOP_SBC_1
525:529
PATST
SPOP
0.9883
More...
Q5T0B9
Zinc finger protein 362
DEG_SPOP_SBC_1
110:114
PATST
SPOP
0.6991
More...
E7ERA6
RING finger protein 223
DEG_SPOP_SBC_1
234:238
PATST
SPOP
0.7877
More...