DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLSTS
Uniprot ID:
Q70CQ3
Source protein:
Ubiquitin carboxyl-terminal hydrolase 30
Source gene:
USP30
Class:
DEG_SPOP_SBC_1
Location:
466:470
E3 ligase:
SPOP
DEGRON score:
0.5113
ASA_SCORE:
75.74
COIL:
0.8776
CONS_SCORE:
0.4592
DSS_SCORE:
0.3468
HELIX:
0.0682
FCONS_SCORE:
0.9851
RIG_SCORE:
0.6904
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R470C
DO223075
ESCA
ICGC
PLSTS
DEG_SPOP_SBC_1
0.8301
p.R470C
DO40851
UCEC
ICGC
PLSTS
DEG_SPOP_SBC_1
0.8301
p.R470C
DO41199
UCEC
ICGC
PLSTS
DEG_SPOP_SBC_1
0.8301
p.N471S
SIDM00194
Colorectal Carcinoma
GDSC
PLSTS
DEG_SPOP_SBC_1
0.3056
p.N471S
SIDM00383
Gastric Carcinoma
GDSC
PLSTS
DEG_SPOP_SBC_1
0.3056
p.N471S
SIDM00252
Biliary Tract Carcinoma
GDSC
PLSTS
DEG_SPOP_SBC_1
0.3056
p.N471S
SIDM01727
Chronic Myelogenous Leukemia
GDSC
PLSTS
DEG_SPOP_SBC_1
0.3056
p.A463T
DO41903
UCEC
ICGC
PLSTS
DEG_SPOP_SBC_1
0.25
p.L474P
TCGA-BR-8591
STAD
TCGA
PLSTS
DEG_SPOP_SBC_1
0.2222
p.L474M
SIDM01016
T-Lymphoblastic Leukemia
GDSC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.L474M
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.D478G
TCGA-A5-A0G2
UCEC
TCGA
PLSTS
DEG_SPOP_SBC_1
0.1111
p.R458Q
TCGA-EI-6507
READ
TCGA
PLSTS
DEG_SPOP_SBC_1
0.1111
p.R458W
TCGA-V5-A7RE
ESCA
TCGA
PLSTS
DEG_SPOP_SBC_1
0.1111
p.R457Q
TCGA-CG-4440
STAD
TCGA
PLSTS
DEG_SPOP_SBC_1
0.0833
Showing 1 to 15 of 15 entries
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Drug responses associated with USP30 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of PLSTS
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
336:340
PLSTS
SPOP
0.9301
More...
Q99490
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
1046:1050
PLSTS
SPOP
0.6945
More...
Q6ZU67
BEN domain-containing protein 4
DEG_SPOP_SBC_1
281:285
PLSTS
SPOP
0.8233
More...
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
553:557
PLSTS
SPOP
0.8233
More...
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
148:152
PLSTS
SPOP
0.9304
More...
Q5XPI4
E3 ubiquitin-protein ligase RNF123
DEG_SPOP_SBC_1
698:702
PLSTS
SPOP
0.9944
More...
Q5THR3
EF-hand calcium-binding domain-containing protein 6
DEG_SPOP_SBC_1
119:123
PLSTS
SPOP
0.6545
More...
O00167
Eyes absent homolog 2
DEG_SPOP_SBC_1
196:200
PLSTS
SPOP
0.8269
More...
Q8TEQ6
Gem-associated protein 5
DEG_SPOP_SBC_1
850:854
PLSTS
SPOP
0.9922
More...
Q9H706
GRB2-associated and regulator of MAPK protein 1
DEG_SPOP_SBC_1
542:546
PLSTS
SPOP
0.9196
More...
Q9UBP5
Hairy/enhancer-of-split related with YRPW motif protein 2
DEG_SPOP_SBC_1
252:256
PLSTS
SPOP
0.7183
More...
Q8NEZ4
Histone-lysine N-methyltransferase 2C
DEG_SPOP_SBC_1
2661:2665
PLSTS
SPOP
0.8392
More...
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
214:218
PLSTS
SPOP
0.9858
More...
Q96Q89
Kinesin-like protein KIF20B
DEG_SPOP_SBC_1
1584:1588
PLSTS
SPOP
0.9863
More...
Q86UK5
Limbin
DEG_SPOP_SBC_1
112:116
PLSTS
SPOP
0.7993
More...
Q8IY33
MICAL-like protein 2
DEG_SPOP_SBC_1
519:523
PLSTS
SPOP
0.9828
More...
Q99570
Phosphoinositide 3-kinase regulatory subunit 4
DEG_SPOP_SBC_1
901:905
PLSTS
SPOP
0.9634
More...
Q96HE9
Proline-rich protein 11
DEG_SPOP_SBC_1
350:354
PLSTS
SPOP
0.9951
More...
Q9H2E6
Semaphorin-6A
DEG_SPOP_SBC_1
1018:1022
PLSTS
SPOP
0.9889
More...
Q6ZUB1
Spermatogenesis-associated protein 31E1
DEG_SPOP_SBC_1
1149:1153
PLSTS
SPOP
0.9944
More...
Q8IY92
Structure-specific endonuclease subunit SLX4
DEG_SPOP_SBC_1
1448:1452
PLSTS
SPOP
0.9903
More...
Q86Y82
Syntaxin-12
DEG_SPOP_SBC_1
90:94
PLSTS
SPOP
0.702
More...
Q9HBL0
Tensin-1
DEG_SPOP_SBC_1
1075:1079
PLSTS
SPOP
0.9851
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
345:349
PLSTS
SPOP
0.979
More...
Q70CQ3
Ubiquitin carboxyl-terminal hydrolase 30
DEG_SPOP_SBC_1
466:470
PLSTS
SPOP
0.5113
More...
Showing 1 to 25 of 26 entries
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