DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PLSTS
Uniprot ID:
Q8TEQ6
Source protein:
Gem-associated protein 5
Source gene:
GEMIN5
Class:
DEG_SPOP_SBC_1
Location:
850:854
E3 ligase:
SPOP
DEGRON score:
0.9922
ASA_SCORE:
49.44
COIL:
0.7024
CONS_SCORE:
0.5033
DSS_SCORE:
0.4718
HELIX:
0.0832
FCONS_SCORE:
0.9791
RIG_SCORE:
0.6766
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A845S
TCGA-21-1083
LUSC
TCGA
PLSTS
DEG_SPOP_SBC_1
0.1944
p.A845S
DO26769
LUSC
ICGC
PLSTS
DEG_SPOP_SBC_1
0.1944
p.P850S
TCGA-FW-A3R5
SKCM
TCGA
PLSTS
DEG_SPOP_SBC_1
0.6752
p.P850S
DO37406
SKCM
ICGC
PLSTS
DEG_SPOP_SBC_1
0.6752
p.K842N
TCGA-GU-A42Q
BLCA
TCGA
PLSTS
DEG_SPOP_SBC_1
0.2222
p.K842N
DO485
BLCA
ICGC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.L849F
DO222427
BTCA
ICGC
PLSTS
DEG_SPOP_SBC_1
0.3056
p.R846C
DO8264
COAD
ICGC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.R846C
DO234336
ESAD
ICGC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.R846C
SIDM00540
Oral Cavity Carcinoma
GDSC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.R846C
ACH-002234
Head and Neck Cancer
CCLE
PLSTS
DEG_SPOP_SBC_1
0.2222
p.R846C
DOK
upper_aerodigestive_tract
COSMIC
PLSTS
DEG_SPOP_SBC_1
0.2222
p.L851P
SIDM00168
Head and Neck Carcinoma
GDSC
PLSTS
DEG_SPOP_SBC_1
0.6471
p.L851P
ACH-000549
Head and Neck Cancer
CCLE
PLSTS
DEG_SPOP_SBC_1
0.6471
Drug responses associated with GEMIN5 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PLSTS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00167
Eyes absent homolog 2
DEG_SPOP_SBC_1
196:200
PLSTS
SPOP
0.8269
More...
O95628
CCR4-NOT transcription complex subunit 4
DEG_SPOP_SBC_1
553:557
PLSTS
SPOP
0.8233
More...
P28562
Dual specificity protein phosphatase 1
DEG_SPOP_SBC_1
148:152
PLSTS
SPOP
0.9304
More...
Q53TQ3
INO80 complex subunit D
DEG_SPOP_SBC_1
214:218
PLSTS
SPOP
0.9858
More...
Q5THR3
EF-hand calcium-binding domain-containing protein 6
DEG_SPOP_SBC_1
119:123
PLSTS
SPOP
0.6545
More...
Q5XPI4
E3 ubiquitin-protein ligase RNF123
DEG_SPOP_SBC_1
698:702
PLSTS
SPOP
0.9944
More...
Q6UXF1
Transmembrane protein 108
DEG_SPOP_SBC_1
345:349
PLSTS
SPOP
0.979
More...
Q70CQ3
Ubiquitin carboxyl-terminal hydrolase 30
DEG_SPOP_SBC_1
466:470
PLSTS
SPOP
0.5113
More...
Q86UK5
Limbin
DEG_SPOP_SBC_1
112:116
PLSTS
SPOP
0.7993
More...
Q86Y82
Syntaxin-12
DEG_SPOP_SBC_1
90:94
PLSTS
SPOP
0.702
More...
Q8IY33
MICAL-like protein 2
DEG_SPOP_SBC_1
519:523
PLSTS
SPOP
0.9828
More...
Q8IY92
Structure-specific endonuclease subunit SLX4
DEG_SPOP_SBC_1
1448:1452
PLSTS
SPOP
0.9903
More...
Q8NEZ4
Histone-lysine N-methyltransferase 2C
DEG_SPOP_SBC_1
2661:2665
PLSTS
SPOP
0.8392
More...
Q8TEQ6
Gem-associated protein 5
DEG_SPOP_SBC_1
850:854
PLSTS
SPOP
0.9922
More...
Q96KQ4
Apoptosis-stimulating of p53 protein 1
DEG_SPOP_SBC_1
336:340
PLSTS
SPOP
0.9301
More...
Q96Q89
Kinesin-like protein KIF20B
DEG_SPOP_SBC_1
1584:1588
PLSTS
SPOP
0.9863
More...
Q99490
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2
DEG_SPOP_SBC_1
1046:1050
PLSTS
SPOP
0.6945
More...
Q99570
Phosphoinositide 3-kinase regulatory subunit 4
DEG_SPOP_SBC_1
901:905
PLSTS
SPOP
0.9634
More...
Q9H2E6
Semaphorin-6A
DEG_SPOP_SBC_1
1018:1022
PLSTS
SPOP
0.9889
More...
Q9H706
GRB2-associated and regulator of MAPK protein 1
DEG_SPOP_SBC_1
542:546
PLSTS
SPOP
0.9196
More...
Q9HBL0
Tensin-1
DEG_SPOP_SBC_1
1075:1079
PLSTS
SPOP
0.9851
More...
Q9UBP5
Hairy/enhancer-of-split related with YRPW motif protein 2
DEG_SPOP_SBC_1
252:256
PLSTS
SPOP
0.7183
More...
Q6ZUB1
Spermatogenesis-associated protein 31E1
DEG_SPOP_SBC_1
1149:1153
PLSTS
SPOP
0.9944
More...
Q96HE9
Proline-rich protein 11
DEG_SPOP_SBC_1
350:354
PLSTS
SPOP
0.9951
More...
Q6ZU67
BEN domain-containing protein 4
DEG_SPOP_SBC_1
281:285
PLSTS
SPOP
0.8233
More...
Q5HYC2
Uncharacterized protein KIAA2026
DEG_SPOP_SBC_1
1617:1621
PLSTS
SPOP
0.5245
More...