DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
PPEY
Uniprot ID:
O60320
Source protein:
Protein FAM189A1
Source gene:
FAM189A1
Class:
ITCH
Location:
251:254
E3 ligase:
ITCH,NEDD4
DEGRON score:
0.909
ASA_SCORE:
80.7
COIL:
0.928
CONS_SCORE:
0.479
DSS_SCORE:
0.5954
HELIX:
0.0425
FCONS_SCORE:
0.8803
RIG_SCORE:
0.7192
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P243L
TCGA-RC-A6M4
LIHC
TCGA
PPEY
ITCH
0.1111
p.P243L
DO223915
LIHC
ICGC
PPEY
ITCH
0.1111
p.R264K
DO233636
GACA
ICGC
PPEY
ITCH
0.0556
p.P252S
DO50970
LICA
ICGC
PPEY
ITCH
0.6752
p.P245S
DO222868
MELA
ICGC
PPEY
ITCH
0.1667
p.P245L
DO37432
SKCM
ICGC
PPEY
ITCH
0.1667
p.P258L
DO38404
STAD
ICGC
PPEY
ITCH
0.2222
p.P242T
SIDM00454
Rhabdomyosarcoma
GDSC
PPEY
ITCH
0.0833
p.P242T
ACH-000689
Sarcoma
CCLE
PPEY
ITCH
0.0833
p.P242T
RH-18
soft_tissue
COSMIC
PPEY
ITCH
0.0833
p.P251S
SIDM01100
Neuroblastoma
GDSC
PPEY
ITCH
0.6752
p.P251S
ACH-000366
Neuroblastoma
CCLE
PPEY
ITCH
0.6752
p.P251S
SK-N-DZ
autonomic_ganglia
COSMIC
PPEY
ITCH
0.6752
p.R264G
SIDM00150
Colorectal Carcinoma
GDSC
PPEY
ITCH
0.0556
p.R264G
KM12
large_intestine
COSMIC
PPEY
ITCH
0.0556
Drug responses associated with FAM189A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of PPEY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O14964
Hepatocyte growth factor-regulated tyrosine kinase substrate
ITCH
234:237
PPEY
ITCH,NEDD4
0.9849
More...
O15047
Histone-lysine N-methyltransferase SETD1A
ITCH
643:646
PPEY
ITCH,NEDD4
0.6336
More...
O43364
Homeobox protein Hox-A2
ITCH
92:95
PPEY
ITCH,NEDD4
0.9063
More...
P20810
Calpastatin
ITCH
615:618
PPEY
ITCH,NEDD4
0.9885
More...
Q01850
Cerebellar degeneration-related protein 2
ITCH
419:422
PPEY
ITCH,NEDD4
0.9911
More...
Q03164
Histone-lysine N-methyltransferase 2A
ITCH
3788:3791
PPEY
ITCH,NEDD4
0.6997
More...
Q12849
G-rich sequence factor 1
ITCH
132:135
PPEY
ITCH,NEDD4
0.7614
More...
Q14118
Dystroglycan 1
ITCH
828:831
PPEY
ITCH,NEDD4
0.9964
More...
Q15678
Tyrosine-protein phosphatase non-receptor type 14
ITCH
749:752
PPEY
ITCH,NEDD4
0.9698
More...
Q15811
Intersectin-1
ITCH
300:303
PPEY
ITCH,NEDD4
0.9101
More...
Q4VCS5
Angiomotin
ITCH
239:242
PPEY
ITCH,NEDD4
0.9966
More...
Q4VCS5
Angiomotin
ITCH
284:287
PPEY
ITCH,NEDD4
0.9928
More...
Q58F21
Bromodomain testis-specific protein
ITCH
16:19
PPEY
ITCH,NEDD4
0.6067
More...
Q5T5X7
BEN domain-containing protein 3
ITCH
243:246
PPEY
ITCH,NEDD4
0.9695
More...
Q8IY63
Angiomotin-like protein 1
ITCH
310:313
PPEY
ITCH,NEDD4
0.9985
More...
Q8IY63
Angiomotin-like protein 1
ITCH
367:370
PPEY
ITCH,NEDD4
0.9955
More...
Q8N5I2
Arrestin domain-containing protein 1
ITCH
402:405
PPEY
ITCH,NEDD4
0.923
More...
Q8WZ42
Titin
ITCH
14140:14143
PPEY
ITCH,NEDD4
0.8834
More...
Q8WZ42
Titin
ITCH
19345:19348
PPEY
ITCH,NEDD4
0.8515
More...
Q8WZ42
Titin
ITCH
26437:26440
PPEY
ITCH,NEDD4
0.6728
More...
Q9NRQ2
Phospholipid scramblase 4
ITCH
30:33
PPEY
ITCH,NEDD4
0.9894
More...
Q9UBK8
Methionine synthase reductase
ITCH
246:249
PPEY
ITCH,NEDD4
0.9386
More...
O14668
Transmembrane gamma-carboxyglutamic acid protein 1
ITCH
193:196
PPEY
ITCH,NEDD4
0.9979
More...
O75153
Clustered mitochondria protein homolog
ITCH
186:189
PPEY
ITCH,NEDD4
0.9952
More...
P81408
Protein FAM189B
ITCH
252:255
PPEY
ITCH,NEDD4
0.9827
More...
Q96JP2
Unconventional myosin-XVB
ITCH
87:90
PPEY
ITCH,NEDD4
0.9288
More...
O60320
Protein FAM189A1
ITCH
251:254
PPEY
ITCH,NEDD4
0.909
More...
Q8TBH0
Arrestin domain-containing protein 2
ITCH
339:342
PPEY
ITCH,NEDD4
0.9109
More...
